RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 RIPK2O43353 540 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 SHOX2O60902 331 aaPredicted RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 LMAN1P49257 510 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 EIF3EP60228 445 aaKnown RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 TFDP2Q14188 446 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 NOMO1Q15155 1222 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 UBAP2Q5T6F2 1119 aaKnown RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 KCTD16Q68DU8 428 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 HIBCHQ6NVY1 386 aaPredicted RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 DENND5BQ6ZUT9 1274 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 TRMT10CQ7L0Y3 403 aaKnown RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 DDX53Q86TM3 631 aaKnown RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 CCDC33Q8N5R6 958 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 NTAN1Q96AB6 310 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 OXCT2Q9BYC2 517 aaPredicted RBP16.31■□□□□ 0.2
CALR-201ENST00000316448 PCDH9Q9HC56 1237 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 RRN3Q9NYV6 651 aa16.31■□□□□ 0.2
CALR-201ENST00000316448 APOL1O14791 398 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 ABLIM3O94929 683 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 CHKAP35790 457 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 GBE1Q04446 702 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 SMARCB1Q12824 385 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 TAF10Q12962 218 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 SEMA3BQ13214 749 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 ARTNQ5T4W7 220 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 IZUMO3Q5VZ72 239 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 MON1AQ86VX9 555 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 PSTKQ8IV42 348 aaKnown RBP16.3■□□□□ 0.2
CALR-201ENST00000316448 SPATA17Q96L03 361 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 ADAM7Q9H2U9 754 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 ANAPC5Q9UJX4 755 aa16.3■□□□□ 0.2
CALR-201ENST00000316448 ZNF638Q14966 1978 aaKnown RBP16.3■□□□□ 0.2
CALR-201ENST00000316448 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 SHBGP04278 402 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 DNAJB2P25686 324 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 YWHAQP27348 245 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 GLUD2P49448 558 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 SKOR1P84550 965 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 SCAPQ12770 1279 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 SLC29A2Q14542 456 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 AGBL2Q5U5Z8 902 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
CALR-201ENST00000316448 RELL1Q8IUW5 271 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 C2orf15Q8WU43 125 aaKnown RBP16.29■□□□□ 0.2
CALR-201ENST00000316448 TKTL2Q9H0I9 626 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 CDC42EP4Q9H3Q1 356 aaKnown RBP16.29■□□□□ 0.2
CALR-201ENST00000316448 FBXO44Q9H4M3 255 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 WDCPQ9H6R7 721 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 LRRC4CQ9HCJ2 640 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 PRKAG2Q9UGJ0 569 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 HEY1Q9Y5J3 304 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 KIAA1671Q9BY89 1806 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 PLXNA3P51805 1871 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 GREB1Q4ZG55 1949 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 DNALI1O14645 258 aaPredicted RBP16.29■□□□□ 0.2
CALR-201ENST00000316448 IRAK2O43187 625 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 CREB3O43889 395 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 LILRB3O75022 631 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 TBX18O95935 607 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 F9P00740 461 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 RBP3P10745 1247 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 P3H1Q32P28 736 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 KDM7AQ6ZMT4 941 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
CALR-201ENST00000316448 P3H4Q92791 437 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 PWWP2AQ96N64 755 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 TMEM109Q9BVC6 243 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 SMOC2Q9H3U7 446 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 USP29Q9HBJ7 922 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
CALR-201ENST00000316448 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
CALR-201ENST00000316448 MYO16Q9Y6X6 1858 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 NR1D1P20393 614 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 TGM2P21980 687 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 IFFO1Q0D2I5 559 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 DPYSQ14117 519 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 KRT71Q3SY84 523 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 EFHC2Q5JST6 749 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 HOOK3Q86VS8 718 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 CCDC25Q86WR0 208 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 TP53INP2Q8IXH6 220 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 ZCCHC9Q8N567 271 aaKnown RBP16.28■□□□□ 0.2
CALR-201ENST00000316448 ZNF461Q8TAF7 563 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 FBXO32Q969P5 355 aa16.28■□□□□ 0.2
CALR-201ENST00000316448 AFF4Q9UHB7 1163 aaKnown RBP16.28■□□□□ 0.2
CALR-201ENST00000316448 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
CALR-201ENST00000316448 SGK1O00141 431 aa16.27■□□□□ 0.2
CALR-201ENST00000316448 FGF18O76093 207 aa16.27■□□□□ 0.2
CALR-201ENST00000316448 RPL10AP62906 217 aaKnown RBP16.27■□□□□ 0.2
CALR-201ENST00000316448 ZNF771Q7L3S4 317 aaPredicted RBP16.27■□□□□ 0.2
CALR-201ENST00000316448 SPRED2Q7Z698 418 aa16.27■□□□□ 0.2
CALR-201ENST00000316448 FIBCD1Q8N539 461 aa16.27■□□□□ 0.2
CALR-201ENST00000316448 FAM71DQ8N9W8 422 aa16.27■□□□□ 0.2
CALR-201ENST00000316448 ARHGEF38Q9NXL2 777 aa16.27■□□□□ 0.2
CALR-201ENST00000316448 NR2E3Q9Y5X4 410 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms