RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 UCKL1Q9NWZ5 548 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 KANSL3Q9P2N6 904 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 EBF1Q9UH73 591 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 SLC24A2Q9UI40 661 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 POLHQ9Y253 713 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 CPQQ9Y646 472 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 ARHGEF35A5YM69 484 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 OR5K4A6NMS3 321 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 CRTAMO95727 393 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 ADSSP30520 456 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 EVI2BP34910 448 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 NR4A2P43354 598 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 HAAOP46952 286 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PEX3P56589 373 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 BFSP1Q12934 665 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 LAPTM5Q13571 262 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 DSC3Q14574 896 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PTPROQ16827 1216 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 SCARA3Q6AZY7 606 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 RINT1Q6NUQ1 792 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 KYAT3Q6YP21 454 aaKnown RBP6.85□□□□□ -1.31
ZNF540-201ENST00000316433 AGMOQ6ZNB7 445 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 ZNF600Q6ZNG1 722 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PRUNE1Q86TP1 453 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 SLC13A5Q86YT5 568 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PPM1KQ8N3J5 372 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.85□□□□□ -1.31
ZNF540-201ENST00000316433 NIPA2Q8N8Q9 360 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 TSPAN14Q8NG11 270 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 SLC35G2Q8TBE7 412 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 KBTBD7Q8WVZ9 684 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 GLG1Q92896 1179 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 C12orf43Q96C57 262 aaKnown RBP6.85□□□□□ -1.31
ZNF540-201ENST00000316433 DCUN1D1Q96GG9 259 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 AMNQ9BXJ7 453 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PACSIN1Q9BY11 444 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 HIPK3Q9H422 1215 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 WASH6PQ9NQA3 447 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 ARHGEF4Q9NR80 690 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 GCNT4Q9P109 453 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 ANKFY1Q9P2R3 1169 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 ADAMTS1Q9UHI8 967 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 SERPINB13Q9UIV8 391 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 DCTN4Q9UJW0 460 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 RIMKLBQ9ULI2 386 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 GRID1Q9ULK0 1009 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 PLA2G4CQ9UP65 541 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 AP4B1Q9Y6B7 739 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 STYXL1Q9Y6J8 313 aa6.85□□□□□ -1.31
ZNF540-201ENST00000316433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 H3BRJ5 948 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 INO80B-WBP1J3KQ70 363 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 TK2O00142 265 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 BMP10O95393 424 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ACSL3O95573 720 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 FGGP02679 453 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PCNAP12004 261 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PKLRP30613 574 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 STAT3P40763 770 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ECE1P42892 770 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 GPD2P43304 727 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 RPL21P46778 160 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CPA2P48052 419 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 NKX2-5P52952 324 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ZBTB16Q05516 673 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CETN1Q12798 172 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 GK3PQ14409 553 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 DGKDQ16760 1214 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 DNAL1Q4LDG9 190 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 OGFRL1Q5TC84 451 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SLX4IPQ5VYV7 408 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PLEKHA7Q6IQ23 1121 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 KCTD20Q7Z5Y7 419 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 C11orf96Q7Z7L8 435 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 KATNAL2Q8IYT4 538 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CHCHD4Q8N4Q1 142 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SLC15A4Q8N697 577 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ANKRD53Q8N9V6 530 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 MINDY2Q8NBR6 621 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 RASSF5Q8WWW0 418 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 KRT35Q92764 455 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PRR11Q96HE9 360 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 MFSD14AQ96MC6 490 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 NACC1Q96RE7 527 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CSRNP1Q96S65 589 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SLC29A1Q99808 456 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SPOCK3Q9BQ16 436 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CDC42EP4Q9H3Q1 356 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 DNAJC18Q9H819 358 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 AAASQ9NRG9 546 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ZNF277Q9NRM2 450 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 AGPAT3Q9NRZ7 376 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 UBA2Q9UBT2 640 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 BCAP29Q9UHQ4 241 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 INPP5FQ9Y2H2 1132 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms