RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SPEM2Q0P670 501 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 MAP7D1Q3KQU3 841 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 PLA2G2CQ5R387 149 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 CCDC183Q5T5S1 534 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 ADGRF1Q5T601 910 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 PIK3R6Q5UE93 754 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 ADAM32Q8TC27 787 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 AZIN2Q96A70 460 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 SEMA4GQ9NTN9 838 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 DLL3Q9NYJ7 618 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 CALCOCO1Q9P1Z2 691 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 LIMA1Q9UHB6 759 aaKnown RBP15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 GMEB2Q9UKD1 530 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 TLR6Q9Y2C9 796 aa15.2■□□□□ 0.02
PPP1CA-201ENST00000312989 LRRC10BA6NIK2 292 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 SART1O43290 800 aaKnown RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 ACSL4O60488 711 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 TSPAN3O60637 253 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 LRP3O75074 770 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 HOXB2P14652 356 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 HARS2P49590 506 aaKnown RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 TBX4P57082 545 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 JAM2P57087 298 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 YWHAZP63104 245 aaKnown RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 PTK2Q05397 1052 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 STX1AQ16623 288 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 PREPLQ4J6C6 727 aaPredicted RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 MPPE1Q53F39 396 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 PMS2CLQ68D20 193 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 RFWD3Q6PCD5 774 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 FAM183BPQ6ZVS7 135 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 NOP9Q86U38 636 aaKnown RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 EPS8L1Q8TE68 723 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 FAM149B1Q96BN6 582 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 LOXL4Q96JB6 756 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 PPP1R13BQ96KQ4 1090 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 SERPINB11Q96P15 392 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 VPS16Q9H269 839 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 POPDC2Q9HBU9 364 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 ASNSD1Q9NWL6 643 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 CACNA2D2Q9NY47 1150 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 THAP10Q9P2Z0 257 aaPredicted RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 MBD1Q9UIS9 605 aaPredicted RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 INVSQ9Y283 1065 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 RAD54BQ9Y620 910 aa15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 MUC22E2RYF6 1773 aaPredicted RBP15.19■□□□□ 0.02
PPP1CA-201ENST00000312989 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 C7P10643 843 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 IL12RB1P42701 662 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 MYL5Q02045 173 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 TYRO3Q06418 890 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 ARTNQ5T4W7 220 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 NUGGCQ68CJ6 796 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 CEP68Q76N32 757 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 TRMT11Q7Z4G4 463 aaKnown RBP15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 ADIPOR2Q86V24 386 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 RLN3Q8WXF3 142 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 SORCS1Q8WY21 1168 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 FUCA2Q9BTY2 467 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 STK33Q9BYT3 514 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 SLC2A11Q9BYW1 496 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 NUCKS1Q9H1E3 243 aaKnown RBP15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 CD93Q9NPY3 652 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 ANO10Q9NW15 660 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 NOCTQ9UK39 431 aaKnown RBP15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 RAB23Q9ULC3 237 aa15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.18■□□□□ 0.02
PPP1CA-201ENST00000312989 KCNU1A8MYU2 1149 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 I6L893 689 aaPredicted RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 TRUB2O95900 331 aaKnown RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 GLI1P08151 1106 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 NDUFV2P19404 249 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 ZNF445P59923 1031 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 RAPGEF1Q13905 1077 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 CSRP2Q16527 193 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 PTPRNQ16849 979 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 MPP7Q5T2T1 576 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 TRNP1Q6NT89 227 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 SLC26A9Q7LBE3 791 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 ANKS1BQ7Z6G8 1248 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 UNC45BQ8IWX7 931 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 CHPFQ8IZ52 775 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 DEFB106AQ8N104 65 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 DDI1Q8WTU0 396 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 PRMT1Q99873 361 aaKnown RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 IRX2Q9BZI1 471 aaPredicted RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 SLC6A17Q9H1V8 727 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 POLMQ9NP87 494 aaPredicted RBP15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 STON1Q9Y6Q2 735 aa15.17■□□□□ 0.02
PPP1CA-201ENST00000312989 LGALS16A8MUM7 142 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms