RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 CDR2Q01850 454 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 CCDC6Q16204 474 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 CTC1Q2NKJ3 1217 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 METTL23Q86XA0 190 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 OR6B3Q8NGW1 331 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 NDNQ99608 321 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
VANGL1-201ENST00000310260 TTPALQ9BTX7 342 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 DNAJC17Q9NVM6 304 aaKnown RBP13.16□□□□□ -0.3
VANGL1-201ENST00000310260 PDP2Q9P2J9 529 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 GRID1Q9ULK0 1009 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 RWDD3Q9Y3V2 267 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.16□□□□□ -0.3
VANGL1-201ENST00000310260 NUMBLQ9Y6R0 609 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 TRANK1O15050 2925 aa13.16□□□□□ -0.3
VANGL1-201ENST00000310260 A0A1W2PPC1 479 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 TMEM110-MUSTN1A8MSY1 372 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 CREB3O43889 395 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 CXCL14O95715 111 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 COMTP21964 271 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 ACAT1P24752 427 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 ERVFC1P60507 584 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 USP4Q13107 963 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 USP41Q3LFD5 358 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 ACSBG2Q5FVE4 666 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 RTP2Q5QGT7 225 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 DPH6Q7L8W6 267 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 ADGRF2Q8IZF7 708 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 CD101Q93033 1021 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 GBP5Q96PP8 586 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 NIF3L1Q9GZT8 377 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 SNX25Q9H3E2 840 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 SEPT11Q9NVA2 429 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 DNAJC12Q9UKB3 198 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 G3BP2Q9UN86 482 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 CYP1A1P04798 512 aaPredicted RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 IMPDH2P12268 514 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 KRT5P13647 590 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 LMO2P25791 158 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 PDCD11Q14690 1871 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 TCEAL1Q15170 157 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 CNPY1Q3B7I2 92 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 OVOS1Q6IE37 1185 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 PAIP2Q9BPZ3 127 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 PLVAPQ9BX97 442 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 LRRC19Q9H756 370 aa13.15□□□□□ -0.3
VANGL1-201ENST00000310260 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
VANGL1-201ENST00000310260 RASA4BC9J798 803 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 CAPN9O14815 690 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 PMM2O15305 246 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 RASA4O43374 803 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 TBX10O75333 385 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 CALCAP01258 141 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 IVDP26440 423 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 GNL1P36915 607 aaPredicted RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ASPAP45381 313 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 SLC34A1Q06495 639 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 AP1B1Q10567 949 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ELAVL2Q12926 359 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 CUL2Q13617 745 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 PDK4Q16654 411 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 GSTA3Q16772 222 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 RBM23Q86U06 439 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 DENND1AQ8TEH3 1009 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 SNF8Q96H20 258 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 LPIN3Q9BQK8 851 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 CYLDQ9NQC7 956 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 GDAP2Q9NXN4 497 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 APEX2Q9UBZ4 518 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ZFP69BQ9UJL9 534 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 TTC36A6NLP5 189 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 H3BNC9 293 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 HNRNPCL1O60812 293 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 SOD2P04179 222 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 URODP06132 367 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 RB1P06400 928 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 ITIH2P19823 946 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 IRS1P35568 1242 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 GLUD2P49448 558 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 PLCB3Q01970 1234 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 MYBPC3Q14896 1274 aa13.14□□□□□ -0.31
VANGL1-201ENST00000310260 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
VANGL1-201ENST00000310260 TMED2Q15363 201 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms