RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 MSI1O43347 362 aaKnown RBP18.52■□□□□ 0.56
CCS-201ENST00000310190 ACSL4O60488 711 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 SLC11A2P49281 568 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 HSF5Q4G112 596 aaPredicted RBP18.52■□□□□ 0.56
CCS-201ENST00000310190 MPPE1Q53F39 396 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 FAM133BQ5BKY9 247 aaKnown RBP18.52■□□□□ 0.56
CCS-201ENST00000310190 OTUD1Q5VV17 481 aaPredicted RBP18.52■□□□□ 0.56
CCS-201ENST00000310190 C1orf210Q8IVY1 113 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 RNF214Q8ND24 703 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 BTN2A3PQ96KV6 586 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 XPO6Q96QU8 1125 aaKnown RBP18.52■□□□□ 0.56
CCS-201ENST00000310190 DNAJC7Q99615 494 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 ADAM22Q9P0K1 906 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 STAP1Q9ULZ2 295 aa18.52■□□□□ 0.56
CCS-201ENST00000310190 SIGLEC16A6NMB1 481 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 K7EQS6 105 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 TULP3O75386 442 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 SERPING1P05155 500 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 CISD3P0C7P0 127 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 TYRP14679 529 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 COL9A1P20849 921 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 TNFAIP3P21580 790 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 CXCR3P49682 368 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 KLHL30Q0D2K2 578 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 GAS6Q14393 721 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 BRMS1LQ5PSV4 323 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 PPP1R15BQ5SWA1 713 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 FAM102AQ5T9C2 384 aaPredicted RBP18.51■□□□□ 0.55
CCS-201ENST00000310190 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 C12orf40Q86WS4 652 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 MCOLN2Q8IZK6 566 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 ZNF557Q8N988 423 aaPredicted RBP18.51■□□□□ 0.55
CCS-201ENST00000310190 CENPIQ92674 756 aaPredicted RBP18.51■□□□□ 0.55
CCS-201ENST00000310190 P2RY11Q96G91 374 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 BBS2Q9BXC9 721 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 ISCUQ9H1K1 167 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 DEC1Q9P2X7 70 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 VPS13AQ96RL7 3174 aa18.51■□□□□ 0.55
CCS-201ENST00000310190 DDX3XO00571 662 aaKnown RBP eCLIP18.5■□□□□ 0.552e-13■■■■□ 25.1
CCS-201ENST00000310190 SCAMP3O14828 347 aaKnown RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 ATG13O75143 517 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 HMBSP08397 361 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 TDGF1P13385 188 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 CCR1P32246 355 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 PTPN9P43378 593 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 PTPN5P54829 565 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 PITX1P78337 314 aaPredicted RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 MRPS21P82921 87 aaKnown RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 TCF15Q12870 199 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 TBX2Q13207 712 aaPredicted RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 C5orf22Q49AR2 442 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 PIK3R6Q5UE93 754 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 NUDT18Q6ZVK8 323 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 KIAA0907Q7Z7F0 614 aaPredicted RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 MAML2Q8IZL2 1156 aaPredicted RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 TTC16Q8NEE8 873 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 PRSS33Q8NF86 280 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 FAM126AQ9BYI3 521 aaPredicted RBP18.5■□□□□ 0.55
CCS-201ENST00000310190 ARHGEF38Q9NXL2 777 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 PAXBP1Q9Y5B6 917 aa18.5■□□□□ 0.55
CCS-201ENST00000310190 C2CD4BA6NLJ0 364 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 KAT7O95251 611 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 EGFP01133 1207 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 APOEP02649 317 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 CYBBP04839 570 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 APODP05090 189 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 CASP14P31944 242 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 FLT3P36888 993 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 SLC6A11P48066 632 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 CCR3P51677 355 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 MTAPQ13126 283 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 ANO4Q32M45 955 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 NAIF1Q69YI7 327 aaPredicted RBP18.49■□□□□ 0.55
CCS-201ENST00000310190 NADSYN1Q6IA69 706 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 TRNP1Q6NT89 227 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 STRADAQ7RTN6 431 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCS-201ENST00000310190 ATP6V0D2Q8N8Y2 350 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 TERB1Q8NA31 727 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 OR8K1Q8NGG5 319 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 PRMT1Q99873 361 aaKnown RBP18.49■□□□□ 0.55
CCS-201ENST00000310190 C11orf70Q9BRQ4 267 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 ADAM33Q9BZ11 813 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 RBSNQ9H1K0 784 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 ARHGEF4Q9NR80 690 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 DDIT4Q9NX09 232 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 SLC12A6Q9UHW9 1150 aa18.49■□□□□ 0.55
CCS-201ENST00000310190 ATG2BQ96BY7 2078 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 NEDD8-MDP1E9PL57 170 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 AP5Z1O43299 807 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 RTN2O75298 545 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 GRAP2O75791 330 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 KRT3P12035 628 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 HOXD9P28356 352 aaPredicted RBP18.48■□□□□ 0.55
CCS-201ENST00000310190 KIR2DL1P43626 348 aaPredicted RBP18.48■□□□□ 0.55
CCS-201ENST00000310190 E2F5Q15329 346 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 ANGPT1Q15389 498 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 ZC3H12AQ5D1E8 599 aaKnown RBP18.48■□□□□ 0.55
CCS-201ENST00000310190 MS4A13Q5J8X5 152 aa18.48■□□□□ 0.55
CCS-201ENST00000310190 PLEKHA7Q6IQ23 1121 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms