RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TGS1Q96RS0 853 aaKnown RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 TRIM31Q9BZY9 425 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 PRDM16Q9HAZ2 1276 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 MARCH2Q9P0N8 246 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 DRG1Q9Y295 367 aaKnown RBP23.35■■□□□ 1.33
IRF3-201ENST00000309877 PCDHA11Q9Y5I1 949 aa23.35■■□□□ 1.33
IRF3-201ENST00000309877 PLXNA4Q9HCM2 1894 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 HIDE1A8MVS5 230 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 MCF2LO15068 1137 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 PECAM1P16284 738 aaPredicted RBP23.34■■□□□ 1.33
IRF3-201ENST00000309877 AMPD1P23109 780 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 TNFRSF8P28908 595 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 CLCN6P51797 869 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 ZNF135P52742 658 aaPredicted RBP23.34■■□□□ 1.33
IRF3-201ENST00000309877 TBX4P57082 545 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 KCTD19Q17RG1 926 aaPredicted RBP23.34■■□□□ 1.33
IRF3-201ENST00000309877 MAP9Q49MG5 647 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 LILRA6Q6PI73 481 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 DNAJB7Q7Z6W7 309 aaPredicted RBP23.34■■□□□ 1.33
IRF3-201ENST00000309877 SLC35B2Q8TB61 432 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 CCSER2Q9H7U1 834 aa23.34■■□□□ 1.33
IRF3-201ENST00000309877 UXTQ9UBK9 157 aaPredicted RBP23.34■■□□□ 1.33
IRF3-201ENST00000309877 ZNF840PA6NDX5 716 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 I6L893 689 aaPredicted RBP23.33■■□□□ 1.33
IRF3-201ENST00000309877 GLUD1P00367 558 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 EIF3EP60228 445 aaKnown RBP23.33■■□□□ 1.33
IRF3-201ENST00000309877 NNTQ13423 1086 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 SNX30Q5VWJ9 437 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 TMCO3Q6UWJ1 677 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 NPNTQ6UXI9 565 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 MIB1Q86YT6 1006 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 KREMEN2Q8NCW0 462 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 PSMG2Q969U7 264 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 HAPLN3Q96S86 360 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 EPAS1Q99814 870 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 OSBPL2Q9H1P3 480 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 DPH5Q9H2P9 285 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 ARFGAP3Q9NP61 516 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 OR12D3Q9UGF7 316 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 ASB3Q9Y575 518 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 HEY1Q9Y5J3 304 aa23.33■■□□□ 1.33
IRF3-201ENST00000309877 FAM72CH0Y354 149 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 LRG1P02750 347 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 CARSP49589 748 aaKnown RBP23.32■■□□□ 1.32
IRF3-201ENST00000309877 TPI1P60174 286 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 CUL1Q13616 776 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 NOMO1Q15155 1222 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 TRIP4Q15650 581 aaPredicted RBP23.32■■□□□ 1.32
IRF3-201ENST00000309877 FAM72AQ5TYM5 149 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 FAM72DQ6L9T8 149 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 RFX8Q6ZV50 586 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 FAM72BQ86X60 149 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 NACA2Q9H009 215 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 SIK2Q9H0K1 926 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 ARHGEF4Q9NR80 690 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 FAM114A2Q9NRY5 505 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 SLC12A8A0AV02 714 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 GRM6O15303 877 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 MOCS2O96007 188 aaPredicted RBP23.32■■□□□ 1.32
IRF3-201ENST00000309877 APOEP02649 317 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 ITGAVP06756 1048 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 PPP3CCP48454 512 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 HCAR3P49019 387 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 KPNA1P52294 538 aaPredicted RBP23.32■■□□□ 1.32
IRF3-201ENST00000309877 SEMA3BQ13214 749 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 OASLQ15646 514 aaKnown RBP23.32■■□□□ 1.32
IRF3-201ENST00000309877 HECTD3Q5T447 861 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 DUPD1Q68J44 220 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 ZNF276Q8N554 614 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 HNRNPLLQ8WVV9 542 aaKnown RBP23.32■■□□□ 1.32
IRF3-201ENST00000309877 SLC39A13Q96H72 371 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 SLC12A6Q9UHW9 1150 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 SNX10Q9Y5X0 201 aa23.32■■□□□ 1.32
IRF3-201ENST00000309877 GREB1Q4ZG55 1949 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 KCNU1A8MYU2 1149 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 BHMG1C9JSJ3 638 aaPredicted RBP23.31■■□□□ 1.32
IRF3-201ENST00000309877 PAGE1O75459 146 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 C8AP07357 584 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 ATP5C1P36542 298 aaKnown RBP23.31■■□□□ 1.32
IRF3-201ENST00000309877 HLTFQ14527 1009 aaKnown RBP eCLIP23.31■■□□□ 1.32
IRF3-201ENST00000309877 TRADDQ15628 312 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 DDX42Q86XP3 938 aaKnown RBP eCLIP23.31■■□□□ 1.32
IRF3-201ENST00000309877 GSPT2Q8IYD1 628 aaKnown RBP23.31■■□□□ 1.32
IRF3-201ENST00000309877 SEC14L1Q92503 715 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 FCRL2Q96LA5 508 aaPredicted RBP23.31■■□□□ 1.32
IRF3-201ENST00000309877 ASIC3Q9UHC3 531 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 DNMT3LQ9UJW3 386 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 NFU1Q9UMS0 254 aa23.31■■□□□ 1.32
IRF3-201ENST00000309877 H7C0C1 242 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 MYBL2P10244 700 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 RBP3P10745 1247 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 ATP5OP48047 213 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 NR2C2P49116 596 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 DRG2P55039 364 aaKnown RBP23.3■■□□□ 1.32
IRF3-201ENST00000309877 ERVK-21P61565 698 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 GPM6BQ13491 265 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 PTK6Q13882 451 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 DPYSQ14117 519 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 DARS2Q6PI48 645 aaKnown RBP23.3■■□□□ 1.32
IRF3-201ENST00000309877 ELMOD1Q8N336 334 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms