RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SDC4P31431 198 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 CXCL12P48061 93 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 C1QBPQ07021 282 aaKnown RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 CHSY1Q86X52 802 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 PHF13Q86YI8 300 aaPredicted RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 HJURPQ8NCD3 748 aaPredicted RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 SYN2Q92777 582 aaPredicted RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 TMA16Q96EY4 203 aaKnown RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 TRIM11Q96F44 468 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 TTYH3Q9C0H2 523 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 HAUS4Q9H6D7 363 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 SLC8A2Q9UPR5 921 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 SHISA7A6NL88 538 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 F5H5T6 163 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 UNGP13051 313 aaPredicted RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 PBX1P40424 430 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 PRKCIP41743 596 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 NRLP54845 237 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 DEUP1Q05D60 604 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 C10orf76Q5T2E6 689 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 Q6ZS52 159 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 TERB1Q8NA31 727 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 PRSS33Q8NF86 280 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 RPLP0P6Q8NHW5 317 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 UCMAQ8WVF2 138 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 FCRL2Q96LA5 508 aaPredicted RBP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.59■□□□□ 0.89
VEGFB-201ENST00000309422 TRIM5Q9C035 493 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 STOML2Q9UJZ1 356 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 CAPN11Q9UMQ6 739 aa20.59■□□□□ 0.89
VEGFB-201ENST00000309422 ZDBF2Q9HCK1 2354 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 H0Y858 1186 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ZBTB24O43167 697 aaPredicted RBP20.58■□□□□ 0.88
VEGFB-201ENST00000309422 SERPING1P05155 500 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 KRT3P12035 628 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 TNFRSF4P43489 277 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 SEC13P55735 322 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 MRPS21P82921 87 aaKnown RBP20.58■□□□□ 0.88
VEGFB-201ENST00000309422 CSTF1Q05048 431 aaKnown RBP20.58■□□□□ 0.88
VEGFB-201ENST00000309422 HSF5Q4G112 596 aaPredicted RBP20.58■□□□□ 0.88
VEGFB-201ENST00000309422 C2CD6Q53TS8 623 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ZC3H12AQ5D1E8 599 aaKnown RBP20.58■□□□□ 0.88
VEGFB-201ENST00000309422 RABGAP1LQ5R372 815 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ACBD5Q5T8D3 534 aaPredicted RBP20.58■□□□□ 0.88
VEGFB-201ENST00000309422 SDE2Q6IQ49 451 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 DCUN1D2Q6PH85 259 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ARCQ7LC44 396 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 IRF2BP2Q7Z5L9 587 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ANKS1BQ7Z6G8 1248 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 C12orf40Q86WS4 652 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ETFBKMTQ8IXQ9 262 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 FAM217AQ8IXS0 508 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 ZNF687Q8N1G0 1237 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 SLC2A11Q9BYW1 496 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 PLK2Q9NYY3 685 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 COL4A3Q01955 1670 aa20.58■□□□□ 0.88
VEGFB-201ENST00000309422 KMT2EQ8IZD2 1858 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 MIA3Q5JRA6 1907 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 TSPAN3O60637 253 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 PENKP01210 267 aaPredicted RBP20.57■□□□□ 0.88
VEGFB-201ENST00000309422 IGLV3-25P01717 112 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 RDXP35241 583 aaKnown RBP20.57■□□□□ 0.88
VEGFB-201ENST00000309422 SLC6A11P48066 632 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 CDH18Q13634 790 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 SLC25A52Q3SY17 297 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 BRMS1LQ5PSV4 323 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 TTC39BQ5VTQ0 682 aaPredicted RBP20.57■□□□□ 0.88
VEGFB-201ENST00000309422 FYB2Q5VWT5 728 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 ACAD10Q6JQN1 1059 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 C3orf20Q8ND61 904 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 KCNV2Q8TDN2 545 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 SLC39A13Q96H72 371 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 PCDHB18PQ96TA0 734 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 FAM126AQ9BYI3 521 aaPredicted RBP20.57■□□□□ 0.88
VEGFB-201ENST00000309422 DEF6Q9H4E7 631 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 WDCPQ9H6R7 721 aa20.57■□□□□ 0.88
VEGFB-201ENST00000309422 TMCO5BA8MYB1 307 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 KCNU1A8MYU2 1149 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 GSCP56915 257 aaPredicted RBP20.56■□□□□ 0.88
VEGFB-201ENST00000309422 ZNF528Q3MIS6 628 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 ARL13BQ3SXY8 428 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 C2orf27AQ580R0 203 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 EOGTQ5NDL2 527 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
VEGFB-201ENST00000309422 MAMSTRQ6ZN01 415 aa20.56■□□□□ 0.88
VEGFB-201ENST00000309422 PRMT8Q9NR22 394 aaPredicted RBP20.56■□□□□ 0.88
VEGFB-201ENST00000309422 CHURC1-FNTBB4DL54 471 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 TBL1XO60907 577 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 GYPCP04921 128 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 MYBL1P10243 752 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 PDGFRAP16234 1089 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 CASP14P31944 242 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 FZD5Q13467 585 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 GAB4Q2WGN9 574 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 MPP7Q5T2T1 576 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 SARM1Q6SZW1 724 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 MON1BQ7L1V2 547 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 MFN1Q8IWA4 741 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 WFIKKN2Q8TEU8 576 aa20.55■□□□□ 0.88
VEGFB-201ENST00000309422 ATRIPQ8WXE1 791 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms