RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 PDK3Q15120 406 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 COLEC11Q9BWP8 271 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 KIAA1257Q9ULG3 409 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 FAM50BQ9Y247 325 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CPDO75976 1380 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 TNFRSF21O75509 655 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 MYL2P10916 166 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 AVPR1AP37288 418 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CNPY1Q3B7I2 92 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZSCAN18Q8TBC5 510 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SVILO95425 2214 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 DGKIO75912 1065 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 USP1O94782 785 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 FKBP9O95302 570 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 TSNQ15631 228 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SMU1Q2TAY7 513 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 C19orf18Q8NEA5 215 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CHCHD6Q9BRQ6 235 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SMURF2Q9HAU4 748 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PREBQ9HCU5 417 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SNX13Q9Y5W8 968 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 NDUFS2O75306 463 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 GYPCP04921 128 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SLC11A2P49281 568 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 KCNK10P57789 538 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PUDPQ08623 228 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ACAP2Q15057 778 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PDK1Q15118 436 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 EZH2Q15910 746 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PARP6Q2NL67 630 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 STX12Q86Y82 276 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CYP4Z2PQ8N1L4 340 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CSGALNACT1Q8TDX6 532 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 KCNB2Q92953 911 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 DCLK3Q9C098 648 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 BMP10O95393 424 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CCNA2P20248 432 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 AKAP5P24588 427 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 OVGP1Q12889 678 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SPATS1Q496A3 300 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PDCD4Q53EL6 469 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 HLA-DQA1Q5Y7H0 255 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CCDC81Q6ZN84 652 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 JAMLQ86YT9 394 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ADSSL1Q8N142 457 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 TAMM41Q96BW9 452 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SNX9Q9Y5X1 595 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 KDM6BO15054 1643 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 HEG1Q9ULI3 1381 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SNPHO15079 494 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PHGDHO43175 533 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ATN1P54259 1190 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 TRIM32Q13049 653 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PROSER3Q2NL68 480 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 WDR72Q3MJ13 1102 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SAMD4BQ5PRF9 694 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 HECTD3Q5T447 861 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 IZUMO3Q5VZ72 239 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CLEC4FQ8N1N0 589 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 MAB21L3Q8N8X9 362 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 TOR1AIP2Q8NFQ8 470 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 OSBPL6Q9BZF3 934 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 EGFRP00533 1210 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 RBP1P09455 135 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 RPS7P62081 194 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 MAPK7Q13164 816 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ZNF177Q13360 481 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ISLR2Q6UXK2 745 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PID1Q7Z2X4 250 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 CYP4Z1Q86W10 505 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ACOT12Q8WYK0 555 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 RAD54LQ92698 747 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 FBXO10Q9UK96 956 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 GTF3C4Q9UKN8 822 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 GPC6Q9Y625 555 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ERI2A8K979 691 aaKnown RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SLC22A2O15244 555 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 LDOC1O95751 146 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 GPR1P46091 355 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 PRIM2P49643 509 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 COASYQ13057 564 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SGCGQ13326 291 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SCARF1Q14162 830 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 SPIRE2Q8WWL2 714 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 ECSITQ9BQ95 431 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 NEK6Q9HC98 313 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 NMRK2Q9NPI5 230 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 GGA3Q9NZ52 723 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 DNAJB4Q9UDY4 337 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 NR2E3Q9Y5X4 410 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 MYO3AQ8NEV4 1616 aa8.53□□□□□ -1.04
PPARGC1B-201ENST00000309241 C17orf102A2RUQ5 167 aa8.52□□□□□ -1.04
PPARGC1B-201ENST00000309241 EEF2KO00418 725 aaKnown RBP8.52□□□□□ -1.04
PPARGC1B-201ENST00000309241 TRMUO75648 421 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms