RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CAPN9O14815 690 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF189O75820 626 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 UPP2O95045 317 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 HOXC8P31273 242 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 GJC1P36383 396 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF132P52740 706 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 CDC42EP1Q00587 391 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 DCAF4L1Q3SXM0 396 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 HP1BP3Q5SSJ5 553 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 FOXB2Q5VYV0 432 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 KAZNQ674X7 775 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 PYROXD1Q8WU10 500 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF296Q8WUU4 475 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 UCMAQ8WVF2 138 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 MCUR1Q96AQ8 359 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 HIC2Q96JB3 615 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 CATSPER2Q96P56 530 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 PAFAH2Q99487 392 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 AGO3Q9H9G7 860 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TBCCD1Q9NVR7 557 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TAS2R1Q9NYW7 299 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TJP2Q9UDY2 1190 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 BARX2Q9UMQ3 279 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TMEM98Q9Y2Y6 226 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 IPPQ9Y573 584 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 SNX9Q9Y5X1 595 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 SCN10AQ9Y5Y9 1956 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 PI4K2BG5E9Z4 385 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 PIK3R2O00459 728 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 MAP3K7O43318 606 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 MAGEC1O60732 1142 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TBX10O75333 385 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 CPA3P15088 417 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 MRPS6P82932 125 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 PRKD1Q15139 912 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 CNPY1Q3B7I2 92 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 ATP13A4Q4VNC1 1196 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TMEM259Q4ZIN3 620 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TFDP3Q5H9I0 405 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 CYP4A22Q5TCH4 519 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TAF2Q6P1X5 1199 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 CAPN12Q6ZSI9 719 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 C12orf29Q8N999 325 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 RNF169Q8NCN4 708 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 SMG8Q8ND04 991 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 STMN2Q93045 179 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 SNX27Q96L92 541 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 TMEM120AQ9BXJ8 343 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 UPF3AQ9H1J1 476 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 EFR3BQ9Y2G0 817 aa10.67□□□□□ -0.7
APOBEC3F-201ENST00000308521 A0A0G2JND7 137 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 M0QZ92 97 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 KLF11O14901 512 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 HMGCRP04035 888 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 DLDP09622 509 aaKnown RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ESRRAP11474 423 aaPredicted RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ATF7P17544 494 aaPredicted RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 NEK3P51956 506 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SESN3P58005 492 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 RBP5P82980 135 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLC18A2Q05940 514 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 OVGP1Q12889 678 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 CCSAPQ6IQ19 270 aaPredicted RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZNF554Q86TJ5 538 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ANKMY2Q8IV38 441 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ALDH16A1Q8IZ83 802 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 NME8Q8N427 588 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 WDTC1Q8N5D0 677 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 NAT8LQ8N9F0 302 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 KLHDC9Q8NEP7 349 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 MRRFQ96E11 262 aaKnown RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ELOVL4Q9GZR5 314 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLC17A7Q9P2U7 560 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ANGPTL2Q9UKU9 493 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 WDR91A4D1P6 747 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 INHAP05111 366 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 MMP8P22894 467 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SERPINB3P29508 390 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 CD52P31358 61 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 CDKN2BP42772 138 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ETV4P43268 484 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ZBTB16Q05516 673 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 ITGA7Q13683 1181 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 RASIP1Q5U651 963 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 DENND1BQ6P3S1 775 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 C3orf62Q6ZUJ4 267 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 LRRC6Q86X45 466 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 SLC4A11Q8NBS3 891 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 HEXIM2Q96MH2 286 aaKnown RBP10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 DNAJB4Q9UDY4 337 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 TBC1D30Q9Y2I9 924 aa10.66□□□□□ -0.7
APOBEC3F-201ENST00000308521 IQANK1A0A1B0GTG1 560 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TCRBV5S1A1TA0A578 114 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 SGK1O00141 431 aa10.65□□□□□ -0.7
APOBEC3F-201ENST00000308521 TPD52L2O43399 206 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms