RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ZBED8Q8IZ13 594 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 DCP1BQ8IZD4 617 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 CYP4X1Q8N118 509 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 PNPLA8Q9NP80 782 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 ATP11BQ9Y2G3 1177 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 VWA8A3KMH1 1905 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 SYN3O14994 580 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 ABHD2P08910 425 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 ZFXP17010 805 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 PDIA2Q13087 525 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 FNBP1LQ5T0N5 605 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 PCGF5Q86SE9 256 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 PSTKQ8IV42 348 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 CCDC13Q8IYE1 715 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 CCDC110Q8TBZ0 833 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 DQX1Q8TE96 717 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 WDCPQ9H6R7 721 aa23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 INTS9Q9NV88 658 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-202ENST00000308354 ZNF638Q14966 1978 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 BCLAF3A2AJT9 711 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 EEF2KO00418 725 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 MFSD11O43934 449 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 SOAT2O75908 522 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 YWHAGP61981 247 aaKnown RBP eCLIP23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 STAT4Q14765 748 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 QPCTQ16769 361 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 MSS51Q4VC12 460 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 TAS1R1Q7RTX1 841 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 ANKMY2Q8IV38 441 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 TP53INP2Q8IXH6 220 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 TKTL2Q9H0I9 626 aa23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 XPO7Q9UIA9 1087 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-202ENST00000308354 H3BRJ5 948 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 CXCL10P02778 98 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 GALTP07902 379 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 HIF1AQ16665 826 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 FUT10Q6P4F1 479 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 RSPO2Q6UXX9 243 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 RFX8Q6ZV50 586 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 CENPUQ71F23 418 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 BCL7CQ8WUZ0 217 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 PGAP3Q96FM1 320 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 LGMNQ99538 433 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 CCDC77Q9BR77 488 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 RAB6BQ9NRW1 208 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 FAM169AQ9Y6X4 670 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 LAMA2P24043 3122 aaKnown RBP23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 A0A087WUV0 522 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 NDC80O14777 642 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 CDH16O75309 829 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 ATP5DP30049 168 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 RTP2Q5QGT7 225 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 RNF34Q969K3 372 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 TTC25Q96NG3 672 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 SLC9A7Q96T83 725 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 NMUR1Q9HB89 426 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 RCOR3Q9P2K3 495 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 SFMBT1Q9UHJ3 866 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 LGALS13Q9UHV8 139 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 SLC27A5Q9Y2P5 690 aa23.21■■□□□ 1.31
PDLIM2-202ENST00000308354 MYO1CO00159 1063 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 ALOX15BO15296 676 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 NR2C2P49116 596 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 SLC45A4Q5BKX6 768 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 SCD5Q86SK9 330 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 NTAN1Q96AB6 310 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 PRMT1Q99873 361 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 WBP1LQ9NX94 342 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 SF3B1O75533 1304 aaKnown RBP eCLIP23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 EXOC1LA0A1B0GW35 172 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 CXCR3P49682 368 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 MRPL58Q14197 206 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 NFE2Q16621 373 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 BTBD8Q5XKL5 378 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 ZNF280DQ6N043 979 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 VSTM1Q6UX27 236 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 TMCO2Q7Z6W1 182 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 CDKL3Q8IVW4 592 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 VPS37BQ9H9H4 285 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 EURLQ9NYK6 297 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 RRN3Q9NYV6 651 aa23.2■■□□□ 1.3
PDLIM2-202ENST00000308354 TMEM120BA0PK00 339 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 MSI1O43347 362 aaKnown RBP23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 F9P00740 461 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 CPB1P15086 417 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 FGFR3P22607 806 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 USP46P62068 366 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 DPYSQ14117 519 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 ARL13BQ3SXY8 428 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 SCML4Q8N228 414 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 RTP4Q96DX8 246 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 CHMP6Q96FZ7 201 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 CRISPLD2Q9H0B8 497 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 OSER1Q9NX31 292 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 PAK5Q9P286 719 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 PCDHB5Q9Y5E4 795 aa23.19■■□□□ 1.3
PDLIM2-202ENST00000308354 A0A1W2PQH9 124 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 HOXA2O43364 376 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 IFNAR2P48551 515 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 SCAPQ12770 1279 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms