RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 VANGL2Q9ULK5 521 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 ATP7BP35670 1465 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 FFAR3O14843 346 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 GPR42O15529 346 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 CALB2P22676 271 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 ELK3P41970 407 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 IL12RB1P42701 662 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 STKLD1Q8NE28 680 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 CLIC5Q9NZA1 410 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PDP2Q9P2J9 529 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 CPA4Q9UI42 421 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PLOD3O60568 738 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 GLRA3O75311 464 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 LRATO95237 230 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
USP38-201ENST00000307017 PDHA2P29803 388 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 FBXO32Q969P5 355 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 TEKT5Q96M29 485 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 POMGNT2Q8NAT1 580 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 MXRA8Q9BRK3 442 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PCDHB2Q9Y5E7 798 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 BAZ2BQ9UIF8 2168 aaKnown RBP12.94□□□□□ -0.34
USP38-201ENST00000307017 KBTBD13C9JR72 458 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 H2AFYO75367 372 aaKnown RBP12.94□□□□□ -0.34
USP38-201ENST00000307017 KCNJ6P48051 423 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 PEX6Q13608 980 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 TAF8Q7Z7C8 310 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 CLIP4Q8N3C7 705 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 MMGT1Q8N4V1 131 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 IGFLR1Q9H665 355 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 SLC12A8A0AV02 714 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 SRSF11Q05519 484 aaKnown RBP12.94□□□□□ -0.34
USP38-201ENST00000307017 STX4Q12846 297 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 BTBD9Q96Q07 612 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 RXFP1Q9HBX9 757 aa12.94□□□□□ -0.34
USP38-201ENST00000307017 TPP1O14773 563 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 OR6B1O95007 311 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 NPY2RP49146 381 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 EFL1Q7Z2Z2 1120 aaKnown RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 GALNT5Q7Z7M9 940 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 ADGRF2Q8IZF7 708 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 CITED4Q96RK1 184 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 KCNK1O00180 336 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 LSM1O15116 133 aaKnown RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 LRG1P02750 347 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 NR3C2P08235 984 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 FBXO48Q5FWF7 155 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 ZCCHC7Q8N3Z6 543 aaKnown RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 DNAJB14Q8TBM8 379 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 FAM84AQ96KN4 292 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 DIABLOQ9NR28 239 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 VPS28Q9UK41 221 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 SIK3Q9Y2K2 1263 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 AP4S1Q9Y587 144 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 TFECO14948 347 aaPredicted RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 NRP2O60462 931 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 HSD3B2P26439 372 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 TOB1P50616 345 aaPredicted RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 TTMPQ5BVD1 217 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 ACER1Q8TDN7 264 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 ROPN1BQ9BZX4 212 aaPredicted RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 ROPN1Q9HAT0 212 aaPredicted RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 CNOT3O75175 753 aaKnown RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 SIN3BO75182 1162 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 RASA1P20936 1047 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 KCNJ2P63252 427 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 TRAF3Q13114 568 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 OXNAD1Q96HP4 312 aaPredicted RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 KIAA1683Q9H0B3 1180 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 SDR42E2A6NKP2 422 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 FCHO1O14526 889 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 MYL4P12829 197 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 AKR1D1P51857 326 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 CENPCQ03188 943 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 ADIGQ0VDE8 80 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 TPGS1Q6ZTW0 290 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 SETD3Q86TU7 594 aaPredicted RBP12.93□□□□□ -0.34
USP38-201ENST00000307017 MYO1HQ8N1T3 1032 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 CAMKK1Q8N5S9 505 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 CYP2W1Q8TAV3 490 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 BTBD10Q9BSF8 475 aa12.93□□□□□ -0.34
USP38-201ENST00000307017 UBDO15205 165 aa12.92□□□□□ -0.34
USP38-201ENST00000307017 NOS1APO75052 506 aaPredicted RBP12.92□□□□□ -0.34
USP38-201ENST00000307017 NAPEPLDQ6IQ20 393 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms