RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PTENP60484 403 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 GUCY1A3Q02108 690 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 IYDQ6PHW0 289 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 RNASE11Q8TAA1 199 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 C11orf84Q9BUA3 381 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 DDX43Q9NXZ2 648 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 F5P12259 2224 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 MYO1CO00159 1063 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 SLITRK3O94933 977 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 IFNA14P01570 189 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CHI3L1P36222 383 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 RAB14P61106 215 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 VSNL1P62760 191 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 HIC1Q14526 733 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM46CQ5VWP2 391 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 NUP93Q8N1F7 819 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ELAC2Q9BQ52 826 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 GINS4Q9BRT9 223 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PTCH2Q9Y6C5 1203 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ABHD14A-ACY1A0A1B0GW23 586 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 SMIM22K7EJ46 135 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ACO1P21399 889 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 EPHB2P29323 1055 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 SLC12A3P55017 1021 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 KCNK10P57789 538 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 NAA20P61599 178 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CDC16Q13042 620 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CNGA3Q16281 694 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PAN2Q504Q3 1202 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 KLHDC7AQ5VTJ3 777 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ARHGAP17Q68EM7 881 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 KLHL24Q6TFL4 600 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 SETD3Q86TU7 594 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 MAML3Q96JK9 1138 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 RNPC3Q96LT9 517 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 TBC1D13Q9NVG8 400 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 TRMT6Q9UJA5 497 aaKnown RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PLAGL2Q9UPG8 496 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 STX7O15400 261 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 APRTP07741 180 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CHRM3P20309 590 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SPRP35270 261 aaPredicted RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 GRB10Q13322 594 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 USP10Q14694 798 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ZC2HC1CQ53FD0 456 aaPredicted RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CDK20Q8IZL9 346 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 RPRD1AQ96P16 312 aaPredicted RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TMCC3Q9ULS5 477 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 PLAAQ9Y263 795 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 BIRC5O15392 142 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CTDNEP1O95476 244 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 MPOP05164 745 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TGM2P21980 687 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CCT8P50990 548 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TCEAL5Q5H9L2 206 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ATAT1Q5SQI0 421 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 KDELC2Q7Z4H8 507 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 POMGNT2Q8NAT1 580 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SPPL2BQ8TCT7 592 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM49BQ9NUQ9 324 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 EIF3LQ9Y262 564 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SQORQ9Y6N5 450 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SESN1Q9Y6P5 492 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 M0QYT0 321 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 EPC1Q9H2F5 836 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SAGE1Q9NXZ1 904 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CDYLQ9Y232 598 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 UQCRBP14927 111 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CNTFP26441 200 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ARSEP51690 589 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 PTK7Q13308 1070 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SGCGQ13326 291 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 MTSS1LQ765P7 747 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF614Q8N883 585 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 GPR20Q99678 358 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SOX13Q9UN79 622 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 MAGEC1O60732 1142 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 NBNO60934 754 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SRP72O76094 671 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TNNI3P19429 210 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 PLA2G4AP47712 749 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TBX4P57082 545 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 FPGSQ05932 587 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 NCF4Q15080 339 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 C17orf53Q8N3J3 647 aaPredicted RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 RMND5AQ9H871 391 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TRHDEQ9UKU6 1024 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 SNX24Q9Y343 169 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ERI2A8K979 691 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 GFPT1Q06210 699 aaPredicted RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 CYTH1Q15438 398 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ATXN7L3BQ96GX2 97 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF668Q96K58 619 aaPredicted RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 TGS1Q96RS0 853 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 C11orf49Q9H6J7 331 aa8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 POLR1DQ9Y2S0 133 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms