RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 DDIT4Q9NX09 232 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 IL37Q9NZH6 218 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 SCML2Q9UQR0 700 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 LTBP2Q14767 1821 aa12.43□□□□□ -0.42
TPM3-202ENST00000302206 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 FNDC1Q4ZHG4 1894 aaPredicted RBP12.42□□□□□ -0.42
TPM3-202ENST00000302206 TBKBP1A7MCY6 615 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 ALOX15BO15296 676 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 GCATO75600 419 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 TSHRP16473 764 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 GOT1P17174 413 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 ACTN2P35609 894 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 PLA2G5P39877 138 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 MAGEA4P43358 317 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 MAGEA6P43360 314 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 RABGGTBP53611 331 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 CCL23P55773 120 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 YWHAGP61981 247 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM3-202ENST00000302206 NME3Q13232 169 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 GPR17Q13304 367 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 DPYSQ14117 519 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 KRT71Q3SY84 523 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 NCBP2-AS2Q69YL0 99 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 ANKS3Q6ZW76 656 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 CENPUQ71F23 418 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
TPM3-202ENST00000302206 PRUNE1Q86TP1 453 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 NUP93Q8N1F7 819 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 OR2W6PQ8NHA6 318 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 DQX1Q8TE96 717 aaKnown RBP12.42□□□□□ -0.42
TPM3-202ENST00000302206 CPT1BQ92523 772 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 FAM122AQ96E09 287 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.42
TPM3-202ENST00000302206 GPR62Q9BZJ7 368 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 PPP1R12CQ9BZL4 782 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 STMN4Q9H169 189 aaPredicted RBP12.42□□□□□ -0.42
TPM3-202ENST00000302206 OSBPL2Q9H1P3 480 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 SMOC2Q9H3U7 446 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 ARHGEF4Q9NR80 690 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.423e-11■□□□□ 9
TPM3-202ENST00000302206 NINJ2Q9NZG7 142 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 HEY1Q9Y5J3 304 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 MICAL3Q7RTP6 2002 aa12.42□□□□□ -0.42
TPM3-202ENST00000302206 ABHD14A-ACY1A0A1B0GW23 586 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 FAM92AA1XBS5 289 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 C5orf60A6NFR6 353 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 E7ESA3 106 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 EEF2KO00418 725 aaKnown RBP12.41□□□□□ -0.42
TPM3-202ENST00000302206 DCLK1O15075 740 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 CHADO15335 359 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 KCNN4O15554 427 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 EFCAB14O75071 495 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 RTN3O95197 1032 aaPredicted RBP12.41□□□□□ -0.42
TPM3-202ENST00000302206 CLTBP09497 229 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 AMPD1P23109 780 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 ARL4CP56559 192 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 BTBD8Q5XKL5 378 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 MFSD5Q6N075 450 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 MSANTD2Q6P1R3 559 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 RFX8Q6ZV50 586 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 TAC4Q86UU9 113 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 ZC3H18Q86VM9 953 aaKnown RBP12.41□□□□□ -0.42
TPM3-202ENST00000302206 MON1AQ86VX9 555 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 PYROXD2Q8N2H3 581 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 ARFGAP2Q8N6H7 521 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 TLCD1Q96CP7 247 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 SPATA17Q96L03 361 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 HAPLN3Q96S86 360 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 FERMT1Q9BQL6 677 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 TMEM39AQ9NV64 488 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 ARHGEF38Q9NXL2 777 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 ABI2Q9NYB9 513 aaPredicted RBP12.41□□□□□ -0.42
TPM3-202ENST00000302206 DTLQ9NZJ0 730 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
TPM3-202ENST00000302206 NCAM2O15394 837 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 IRAK2O43187 625 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 AGTP01019 485 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 SHBGP04278 402 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 IVLP07476 585 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 RBL1P28749 1068 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 GLUD2P49448 558 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 PSEN1P49768 467 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 GYS2P54840 703 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
TPM3-202ENST00000302206 GBE1Q04446 702 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 SLC10A2Q12908 348 aaPredicted RBP12.4□□□□□ -0.42
TPM3-202ENST00000302206 KCNJ11Q14654 390 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 PPP2R5DQ14738 602 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 STAT4Q14765 748 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 PDK1Q15118 436 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 PRKD1Q15139 912 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms