RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CITO14578 2027 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 GLRA3O75311 464 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 TBX10O75333 385 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 KCNA2P16389 499 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 DLG2Q15700 870 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 CA9Q16790 459 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 C6orf10Q5SRN2 563 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 SCARA3Q6AZY7 606 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 IGDCC3Q8IVU1 814 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 FAM156AQ8NDB6 213 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 PIWIL2Q8TC59 973 aaKnown RBP13.68□□□□□ -0.22
CASC4-201ENST00000299957 MAGEB5Q9BZ81 275 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 CDY2AQ9Y6F7 541 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
CASC4-201ENST00000299957 C9JVG2 144 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 H3BRB1 525 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 SCAMP3O14828 347 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 IL18RAPO95256 599 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 CSE1LP55060 971 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 GPX6P59796 221 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ABHD15Q6UXT9 468 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 UNC5AQ6ZN44 842 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 TFAP2DQ7Z6R9 452 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ACO2Q99798 780 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 MRPL1Q9BYD6 325 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 GRIP2Q9C0E4 1043 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 CYP2B6P20813 491 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ATP6V1C1P21283 382 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 CYP1B1Q16678 543 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 APOBEC3FQ8IUX4 373 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 MPP5Q8N3R9 675 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 CLEC4CQ8WTT0 213 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 PHACTR1Q9C0D0 580 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ING2Q9H160 280 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 SDK1Q7Z5N4 2213 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 B3GAT3O94766 335 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 TRMT5Q32P41 509 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 AGKQ53H12 422 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 TREML2Q5T2D2 321 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 XRRA1Q6P2D8 792 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 NIPA1Q7RTP0 329 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 RAB44Q7Z6P3 723 aaPredicted RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 C12orf56Q8IXR9 622 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 RMDN1Q96DB5 314 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 EPAS1Q99814 870 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 PPCSQ9HAB8 311 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 XPNPEP3Q9NQH7 507 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 ARHGEF38Q9NXL2 777 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 CPSF3Q9UKF6 684 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
CASC4-201ENST00000299957 ANGPTL3Q9Y5C1 460 aa13.67□□□□□ -0.22
CASC4-201ENST00000299957 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 SAC3D1A6NKF1 404 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 GPR25O00155 361 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 IRF6O14896 467 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 ADCYAP1R1P41586 468 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 OASLQ15646 514 aaKnown RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 BTBD8Q5XKL5 378 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 METTL23Q86XA0 190 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 EFHBQ8N7U6 833 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 DDX1Q92499 740 aaKnown RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 FAM193BQ96PV7 902 aaPredicted RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 AFF4Q9UHB7 1163 aaKnown RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 CDYLQ9Y232 598 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 PEX11AO75192 247 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 PIGNO95427 931 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 CYP1A1P04798 512 aaPredicted RBP13.66□□□□□ -0.22
CASC4-201ENST00000299957 MCF2P10911 925 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 ANPEPP15144 967 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 TKTL1P51854 596 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 C1orf127Q8N9H9 656 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 SH3TC2Q8TF17 1288 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 NCLNQ969V3 563 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 SAR1AQ9NR31 198 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 CAPN8A6NHC0 703 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 GRIK1P39086 918 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 MGAT5Q09328 741 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 CTBP1Q13363 440 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 SGO1Q5FBB7 561 aa13.66□□□□□ -0.22
CASC4-201ENST00000299957 SEL1L3Q68CR1 1132 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms