RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ACO2Q99798 780 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 MYH9P35579 1960 aaKnown RBP13.72□□□□□ -0.21
TNFRSF21-201ENST00000296861 GPR25O00155 361 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 CSPG5O95196 566 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 GOT1P17174 413 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 RPS6KA3P51812 740 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 NRF1Q16656 503 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 PMF1Q6P1K2 205 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 ENDOVQ8N8Q3 282 aaKnown RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 PCDH19Q8TAB3 1148 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 PIWIL2Q8TC59 973 aaKnown RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 CATSPER2Q96P56 530 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 NT5C1AQ9BXI3 368 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 SIK2Q9H0K1 926 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 CDT1Q9H211 546 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 COPS7BQ9H9Q2 264 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 GTSE1Q9NYZ3 720 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 LY75O60449 1722 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 GSTA2P09210 222 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 ACAT1P24752 427 aaKnown RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 ASPAP45381 313 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 EFNA5P52803 228 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 SEPT6Q14141 434 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 KIZQ2M2Z5 673 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 CTC1Q2NKJ3 1217 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 PHTF2Q8N3S3 785 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 SLC4A11Q8NBS3 891 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 PTCD3Q96EY7 689 aaKnown RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 GRIP2Q9C0E4 1043 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 ATXN3LQ9H3M9 355 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 DHX33Q9H6R0 707 aaKnown RBP13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 WDR35Q9P2L0 1181 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 AP4E1Q9UPM8 1137 aa13.71□□□□□ -0.21
TNFRSF21-201ENST00000296861 DLG1Q12959 904 aa13.71□□□□□ -0.22
TNFRSF21-201ENST00000296861 NOMO1Q15155 1222 aa13.71□□□□□ -0.22
TNFRSF21-201ENST00000296861 CCDC142Q17RM4 750 aa13.71□□□□□ -0.22
TNFRSF21-201ENST00000296861 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.22
TNFRSF21-201ENST00000296861 SKA1Q96BD8 255 aa13.71□□□□□ -0.22
TNFRSF21-201ENST00000296861 KCNK4Q9NYG8 393 aa13.71□□□□□ -0.22
TNFRSF21-201ENST00000296861 CITO14578 2027 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 MAFGO15525 162 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PSMB4P28070 264 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 GNL1P36915 607 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PLK1P53350 603 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SATL1Q86VE3 508 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 OR6Y1Q8NGX8 325 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SREK1Q8WXA9 508 aaKnown RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 OMDQ99983 421 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 R3HDMLQ9H3Y0 253 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 TMEM216Q9P0N5 145 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PDP2Q9P2J9 529 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF212Q9UDV6 495 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 TLK1Q9UKI8 766 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 TBC1D12O60347 775 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 RNASEH1O60930 286 aaKnown RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 BPGMP07738 259 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 AKAP5P24588 427 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PPP1R2P3Q6NXS1 205 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 STRA8Q7Z7C7 330 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PNPLA1Q8N8W4 532 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 CDRT15Q96T59 188 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PRPF18Q99633 342 aaKnown RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF518BQ9C0D4 1074 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 XPNPEP3Q9NQH7 507 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 THAP1Q9NVV9 213 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF214Q9UL59 606 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 TEX264Q9Y6I9 313 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC15A5A6NIM6 579 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SMAPO00193 183 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PMM2O15305 246 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC4A1P02730 911 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 MRPS5P82675 430 aaKnown RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 MAP7Q14244 749 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 FAM47CQ5HY64 1035 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 TMEM198Q66K66 360 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 RWDD4Q6NW29 188 aaKnown RBP13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 OR52K1Q8NGK4 314 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 HIC2Q96JB3 615 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PCDH18Q9HCL0 1135 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PTPRHQ9HD43 1115 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 PDGFCQ9NRA1 345 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 GGA3Q9NZ52 723 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 DTNAQ9Y4J8 743 aa13.7□□□□□ -0.22
TNFRSF21-201ENST00000296861 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 STX16-NPEPL1H3BU86 382 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 TM7SF2O76062 418 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 RTN3O95197 1032 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms