RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 H3BRJ5 948 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 C2CD2LO14523 706 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 MFSD11O43934 449 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 PMPCBO75439 489 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 CRYBB1P53674 252 aaPredicted RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 RGMBQ6NW40 437 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 TFAP2DQ7Z6R9 452 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 MTDHQ86UE4 582 aaKnown RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 NUDCD3Q8IVD9 361 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ABI1Q8IZP0 508 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 TTC39CQ8N584 583 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 FITM2Q8N6M3 262 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 NAT8LQ8N9F0 302 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 BHMTQ93088 406 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 WNT8BQ93098 351 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ZNF669Q96BR6 464 aaPredicted RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 SGSM3Q96HU1 749 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 TKTL2Q9H0I9 626 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 MANSC1Q9H8J5 431 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 CPSF2Q9P2I0 782 aaKnown RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 A8MUI8 341 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 SOAT2O75908 522 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 STAU1O95793 577 aaKnown RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 SNCBQ16143 134 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 CCDC6Q16204 474 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ANKRD20A2Q5SQ80 823 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ANKRD20A1Q5TYW2 823 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 CYB5D1Q6P9G0 228 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 RNF135Q8IUD6 432 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ARID3BQ8IVW6 561 aaPredicted RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 OR52K1Q8NGK4 314 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 FNIP1Q8TF40 1166 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 KBTBD7Q8WVZ9 684 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ZNF75CPQ92670 426 aaPredicted RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 SERAC1Q96JX3 654 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 MAGEB18Q96M61 343 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 TMEM209Q96SK2 561 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 PIGVQ9NUD9 493 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 ZFATQ9P243 1243 aa9.6□□□□□ -0.87
PRDM9-201ENST00000296682 PPARGC1AQ9UBK2 798 aaKnown RBP9.6□□□□□ -0.87
PRDM9-201ENST00000296682 RBM47A0AV96 593 aaKnown RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ARL5CA6NH57 179 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 FAM72CH0Y354 149 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ZNF865P0CJ78 1059 aaPredicted RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 HOXD8P13378 290 aaPredicted RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ERCC2P18074 760 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 TYK2P29597 1187 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 L1CAMP32004 1257 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 SLC18A1P54219 525 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ATN1P54259 1190 aaPredicted RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 PRKCZQ05513 592 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 KCNA10Q16322 511 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 TIGD5Q53EQ6 642 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 FAM72AQ5TYM5 149 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 BTBD8Q5XKL5 378 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 FAM72DQ6L9T8 149 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 FAM72BQ86X60 149 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 DCLK2Q8N568 766 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 LRRC52Q8N7C0 313 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 SMG8Q8ND04 991 aaKnown RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 AZIN2Q96A70 460 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 STAMBPL1Q96FJ0 436 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 P2RY11Q96G91 374 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 TSSK1BQ9BXA7 367 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 DTLQ9NZJ0 730 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 MORF4L1Q9UBU8 362 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 SCN1AP35498 2009 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 IL4RP24394 825 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 PNPLA4P41247 253 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 MATKP42679 507 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 MRPS5P82675 430 aaKnown RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 MRPS6P82932 125 aaKnown RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 INCA1Q0VD86 236 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 CHI3L2Q15782 390 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ARL13BQ3SXY8 428 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 GPRIN1Q7Z2K8 1008 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 TMEM110Q86TL2 294 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 KIRREL3Q8IZU9 778 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 PNPLA1Q8N8W4 532 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 SCYL1Q96KG9 808 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 KATNBL1Q9H079 304 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 LAMA2P24043 3122 aaKnown RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 PTGESO14684 152 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 MDM4O15151 490 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 PRKAR2AP13861 404 aaKnown RBP9.59□□□□□ -0.87
PRDM9-201ENST00000296682 AVPR1AP37288 418 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ETFBP38117 255 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ACADSBP45954 432 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 ARFIP2P53365 341 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 CDC42EP1Q00587 391 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 KDSRQ06136 332 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 DDR2Q16832 855 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 SLC25A41Q8N5S1 370 aa9.59□□□□□ -0.87
PRDM9-201ENST00000296682 CDKL2Q92772 493 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms