RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 FAM200BP0CF97 657 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 DGKGP49619 791 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 GEN1Q17RS7 908 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 SGSM1Q2NKQ1 1148 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 PLEKHG6Q3KR16 790 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 C10orf120Q5SQS8 335 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 RESP18Q5W5W9 173 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 SDE2Q6IQ49 451 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 CYFIP2Q96F07 1278 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 PAGE5Q96GU1 130 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 HNRNPABQ99729 332 aaKnown RBP9.77□□□□□ -0.85
CNOT9-202ENST00000295701 FBXO44Q9H4M3 255 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 CYLDQ9NQC7 956 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.77□□□□□ -0.85
CNOT9-202ENST00000295701 WDR35Q9P2L0 1181 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 FBXO10Q9UK96 956 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 CLEC4EQ9ULY5 219 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 STON1Q9Y6Q2 735 aa9.77□□□□□ -0.85
CNOT9-202ENST00000295701 ASXL3Q9C0F0 2248 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 FASNP49327 2511 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 A0A1W2PQD8 194 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 TMEM8BA6NDV4 472 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 NDUFS2O75306 463 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 ZNF217O75362 1048 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 TRIM49P0CI25 452 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 TRIM49CP0CI26 452 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 BMP2P12643 396 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 CD58P19256 250 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 HOXD12P35452 270 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 PIK3CAP42336 1068 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 IL12RB1P42701 662 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 PLA2G4AP47712 749 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 ME1P48163 572 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 GCLMP48507 274 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 KIF11P52732 1056 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 AP3M2P53677 418 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 PPP3CAQ08209 521 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 PKP1Q13835 747 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 TRIP6Q15654 476 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 FUT11Q495W5 492 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 PREPLQ4J6C6 727 aaPredicted RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 RAB44Q7Z6P3 723 aaPredicted RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 SLCO6A1Q86UG4 719 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 UNC93AQ86WB7 457 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 SLC9A9Q8IVB4 645 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 SORCS1Q8WY21 1168 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 NDRG1Q92597 394 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 TOE1Q96GM8 510 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 GPR174Q9BXC1 333 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 MKRN2Q9H000 416 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 MAGEF1Q9HAY2 307 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 IL21RQ9HBE5 538 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 DNAAF2Q9NVR5 837 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 FAM13BQ9NYF5 915 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 DNMT3LQ9UJW3 386 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 NAGPAQ9UK23 515 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 LSM7Q9UK45 103 aaKnown RBP9.76□□□□□ -0.85
CNOT9-202ENST00000295701 SLCO1B1Q9Y6L6 691 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 ACACAQ13085 2346 aa9.76□□□□□ -0.85
CNOT9-202ENST00000295701 URB1O60287 2271 aaKnown RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 A0A1B0GVL5 298 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 MAN1A2O60476 641 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 RPN1P04843 607 aaKnown RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 SYPP08247 313 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 SLFN14P0C7P3 912 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 ZSCAN22P10073 491 aaPredicted RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 PDIA4P13667 645 aaKnown RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 P4HA1P13674 534 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 CD6P30203 668 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 CORO1AP31146 461 aaKnown RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 DPP6P42658 865 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 VAMP7P51809 220 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 MFAP3P55082 362 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 BNC1Q01954 994 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 DNM1Q05193 864 aaKnown RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 PTK2Q05397 1052 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 INCA1Q0VD86 236 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 EFEMP1Q12805 493 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 GRIK2Q13002 908 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 FYB2Q5VWT5 728 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 TMEM215Q68D42 235 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 C19orf48Q6RUI8 117 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 CACUL1Q86Y37 369 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 MARCH9Q86YJ5 346 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 CEP57L1Q8IYX8 460 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 GOLGA5Q8TBA6 731 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 TAS1R2Q8TE23 839 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 MIR1-1HGQ9H1L0 117 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 PRDM16Q9HAZ2 1276 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 ITM2CQ9NQX7 267 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 EXOC1Q9NV70 894 aa9.75□□□□□ -0.85
CNOT9-202ENST00000295701 WSB2Q9NYS7 404 aaPredicted RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 THAP10Q9P2Z0 257 aaPredicted RBP9.75□□□□□ -0.85
CNOT9-202ENST00000295701 RASAL2Q9UJF2 1139 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms