RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 RGS9BPQ6ZS82 235 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 ARMC2Q8NEN0 867 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 MYLPFQ96A32 169 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 TTPALQ9BTX7 342 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 PDZK1P1A8MUH7 402 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 EVPLLA8MZ36 301 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 EIF3HO15372 352 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 SERPINA4P29622 427 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 TNFSF9P41273 254 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 KCNK10P57789 538 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 HIC1Q14526 733 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 LRRC8DQ7L1W4 858 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 SETD3Q86TU7 594 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 ACOT9Q9Y305 439 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 ASTN1O14525 1302 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 O00370 1275 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ZSCAN9O15535 394 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 MGAT5Q09328 741 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ARMC12Q5T9G4 340 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 MFSD4BQ5TF39 518 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ANLNQ9NQW6 1124 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 RARGP13631 454 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ZNF7P17097 686 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 POLE2P56282 527 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ZACNQ401N2 412 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 STRA8Q7Z7C7 330 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 VAV3Q9UKW4 847 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 F8VP50 259 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 H0Y3Z8 333 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 KDSRQ06136 332 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 TMEM259Q4ZIN3 620 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 NAF1Q96HR8 494 aaKnown RBP18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ILKAPQ9H0C8 392 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 GID8Q9NWU2 228 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 FAM153AQ9UHL3 310 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 FBXO10Q9UK96 956 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 PCDHA2Q9Y5H9 948 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 INHAP05111 366 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 FBXL19Q6PCT2 694 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 FAM9CQ8IZT9 166 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 FAR2Q96K12 515 aa18.17■□□□□ 0.5
CDC42EP3-201ENST00000295324 ARIH2O95376 493 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 NPY2RP49146 381 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 TMED1Q13445 227 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 CHI3L2Q15782 390 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 SH2D3CQ8N5H7 860 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 TMEM159Q96B96 161 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 POLR1EQ9GZS1 481 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 STK39Q9UEW8 545 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 EIF3LQ9Y262 564 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 PIK3C2AO00443 1686 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 SIGLEC16A6NMB1 481 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 GLUD2P49448 558 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 POU6F1Q14863 301 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 TRIML2Q8N7C3 387 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 EPS8L1Q8TE68 723 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 MANSC1Q9H8J5 431 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 GPAMQ9HCL2 828 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 OR12D3Q9UGF7 316 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 RUVBL2Q9Y230 463 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 MTO1Q9Y2Z2 717 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 OCM2P0CE71 109 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 OCMP0CE72 109 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 FUT2Q10981 343 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 ITGA9Q13797 1035 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 RD3Q7Z3Z2 195 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 PTAR1Q7Z6K3 402 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 SPPL2BQ8TCT7 592 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 FUCA2Q9BTY2 467 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 PADI3Q9ULW8 664 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 SHOC2Q9UQ13 582 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 PCDHA3Q9Y5H8 950 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 DYRK3O43781 588 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 CCNE2O96020 404 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 MMP13P45452 471 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 TGM3Q08188 693 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 ACOX1Q15067 660 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 HYIQ5T013 277 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 CACHD1Q5VU97 1274 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 SLC26A11Q86WA9 606 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 SUGP1Q8IWZ8 645 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 ENO1P06733 434 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 PTPN3P26045 913 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 ATP6V1E1P36543 226 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 LLGL2Q6P1M3 1020 aa18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 GAS2L1Q99501 681 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 NXF3Q9H4D5 531 aaKnown RBP18.16■□□□□ 0.5
CDC42EP3-201ENST00000295324 KNDC1Q76NI1 1749 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 CDC25CP30307 473 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 SOAT1P35610 550 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 MAPK8P45983 427 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 ZC3H12AQ5D1E8 599 aaKnown RBP18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 MFSD7Q6UXD7 560 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 SNX5Q9Y5X3 404 aa18.15■□□□□ 0.5
CDC42EP3-201ENST00000295324 TREHO43280 583 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms