RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ADGRE1Q14246 886 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 NOMO1Q15155 1222 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF410Q86VK4 478 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TNS4Q8IZW8 715 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TSPAN14Q8NG11 270 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 PKP2Q99959 881 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 C17orf75Q9HAS0 396 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 RSL24D1Q9UHA3 163 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 RAB26Q9ULW5 256 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 PCDHA10Q9Y5I2 948 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TCRBV5S1A1TA0A578 114 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TFPTP0C1Z6 253 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 PIM1P11309 404 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ADORA2AP29274 412 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TYK2P29597 1187 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 SERPINB9P50453 376 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 SESN2P58004 480 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 KRT76Q01546 638 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TFDP2Q14188 446 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 C15orf59Q2T9L4 293 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ARHGEF16Q5VV41 709 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 BNC2Q6ZN30 1099 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 FAM156AQ8NDB6 213 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 MCPH1Q8NEM0 835 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
LMX1A-201ENST00000294816 MARK4Q96L34 752 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 ADPGKQ9BRR6 497 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 IDI2Q9BXS1 227 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 HAPLN2Q9GZV7 340 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 COG4Q9H9E3 785 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 CYP26B1Q9NR63 512 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 DOLKQ9UPQ8 538 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 EFR3BQ9Y2G0 817 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 FOCADQ5VW36 1801 aa10.57□□□□□ -0.72
LMX1A-201ENST00000294816 STX16-NPEPL1H3BU86 382 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 AP1G1O43747 822 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PLIN3O60664 434 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 GLRA3O75311 464 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CSPG5O95196 566 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 HMGCRP04035 888 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PRKCHP24723 683 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 TNFSF9P41273 254 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 EMP3P54852 163 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ABCE1P61221 599 aaKnown RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PRAMEP78395 509 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 SLC9B1Q4ZJI4 515 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ITPRIPL1Q6GPH6 555 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 NUP93Q8N1F7 819 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 NIPA2Q8N8Q9 360 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 MOCOSQ96EN8 888 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF512Q96ME7 567 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CPXM1Q96SM3 734 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 RBM38Q9H0Z9 239 aaKnown RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 WDR55Q9H6Y2 383 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PNPLA8Q9NP80 782 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 NGRNQ9NPE2 291 aaKnown RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 NR2E3Q9Y5X4 410 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 WDR27A2RRH5 827 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PRPSAP2O60256 369 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 TRUB2O95900 331 aaKnown RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 AMHP03971 560 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CDH2P19022 906 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 L1CAMP32004 1257 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ENTPD1P49961 510 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PSMD7P51665 324 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 RPS6P62753 249 aaKnown RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CDK18Q07002 472 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ART3Q13508 389 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PDE1CQ14123 709 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PCLAFQ15004 111 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CES3Q6UWW8 571 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PATL1Q86TB9 770 aaKnown RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ZBTB46Q86UZ6 589 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 FAM160B2Q86V87 743 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CATSPER1Q8NEC5 780 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 SYTL5Q8TDW5 730 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ATP6V0A1Q93050 837 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 HAUS8Q9BT25 410 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 NIF3L1Q9GZT8 377 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 XPNPEP3Q9NQH7 507 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 RRN3Q9NYV6 651 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 TMEM216Q9P0N5 145 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 EMCNQ9ULC0 261 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 MAGED2Q9UNF1 606 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-201ENST00000294816 DGAT1O75907 488 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 FBXO21O94952 628 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 C1QAP02745 245 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PDGFRBP09619 1106 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 SFNP31947 248 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ABCG1P45844 678 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CDH8P55286 799 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 CDH15P55291 814 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 NAA20P61599 178 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PRKCEQ02156 737 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 TMEM132AQ24JP5 1023 aa10.56□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF699Q32M78 642 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms