RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 MRPS22P82650 360 aaKnown RBP15.15■□□□□ 0.02
CCNF-201ENST00000293968 GOLGA7BQ2TAP0 167 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 FRMD7Q6ZUT3 714 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 ARPINQ7Z6K5 226 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 FAM83AQ86UY5 434 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 ABTB1Q969K4 478 aaPredicted RBP15.15■□□□□ 0.02
CCNF-201ENST00000293968 MOCOSQ96EN8 888 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 WRNIP1Q96S55 665 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 TEX13BQ9BXU2 312 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 TMEM134Q9H6X4 195 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 TRPC5Q9UL62 973 aaPredicted RBP15.15■□□□□ 0.02
CCNF-201ENST00000293968 ARHGAP26Q9UNA1 814 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 PPME1Q9Y570 386 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 ZNF831Q5JPB2 1677 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 BIRC5O15392 142 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 SPATA31D3P0C874 917 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 PRKCHP24723 683 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 NDST1P52848 882 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 COG7P83436 770 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 EML3Q32P44 896 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 SPATA31D4Q6ZUB0 917 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 ARCQ7LC44 396 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 B3GNT5Q9BYG0 378 aa15.15■□□□□ 0.02
CCNF-201ENST00000293968 CPSF3Q9UKF6 684 aaKnown RBP15.15■□□□□ 0.02
CCNF-201ENST00000293968 MSCO60682 206 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 P4HA1P13674 534 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 CLCN3P51790 818 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 BOLA3Q53S33 107 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 AAGABQ6PD74 315 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 KYAT3Q6YP21 454 aaKnown RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 RBM44Q6ZP01 1051 aaKnown RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 FIS1Q9Y3D6 152 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 PCDHA11Q9Y5I1 949 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MAFBQ9Y5Q3 323 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 COMMD3-BMI1R4GMX3 469 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 BUD23O43709 281 aaKnown RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 SNNO75324 88 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 CLPTM1O96005 669 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 AOC1P19801 751 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 CPOXP36551 454 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 GABRB2P47870 512 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 ALDH1A3P47895 512 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MCCD1P59942 119 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 R3HDM1Q15032 1099 aaKnown RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 CYTH1Q15438 398 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 SLC5A9Q2M3M2 681 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 JADE1Q6IE81 842 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MPZL3Q6UWV2 235 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 PQLC3Q8N755 202 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 ADAM32Q8TC27 787 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 HPDLQ96IR7 371 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 ZNF778Q96MU6 729 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 FRMD8Q9BZ67 464 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 TMEM216Q9P0N5 145 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 PSAT1Q9Y617 370 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 HMX2A2RU54 273 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MX2P20592 715 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MAP3K21Q5TCX8 1036 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MBLAC2Q68D91 279 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 SESTD1Q86VW0 696 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 Q9H521 79 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MYOZ2Q9NPC6 264 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 SLX4Q8IY92 1834 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 LACTBL1A8MY62 500 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 USP12O75317 370 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 COX4I1P13073 169 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 UBA1P22314 1058 aaKnown RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 FSCBQ5H9T9 825 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 NBPF12Q5TAG4 269 aaPredicted RBP15.14■□□□□ 0.01
CCNF-201ENST00000293968 C1orf127Q8N9H9 656 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 FAM81AQ8TBF8 368 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 MARK4Q96L34 752 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 SIGLEC10Q96LC7 697 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 LGMNQ99538 433 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 PNPLA8Q9NP80 782 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 RNF19AQ9NV58 838 aa15.14■□□□□ 0.01
CCNF-201ENST00000293968 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 C2CD4BA6NLJ0 364 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 HNRNPRO43390 633 aaKnown RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 PLIN3O60664 434 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 EGFRP00533 1210 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 CPA3P15088 417 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 ITGAXP20702 1163 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 BACE1P56817 501 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 MSLNQ13421 630 aaPredicted RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 PDK2Q15119 407 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 TRNP1Q6NT89 227 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 ACOT1Q86TX2 421 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 KCNK16Q96T55 309 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 COPS7BQ9H9Q2 264 aaPredicted RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 ATG7O95352 703 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 FGF3P11487 239 aaPredicted RBP15.13■□□□□ 0.01
CCNF-201ENST00000293968 LCP1P13796 627 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 TGM2P21980 687 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 GPD2P43304 727 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 FLOT2Q14254 428 aa15.13■□□□□ 0.01
CCNF-201ENST00000293968 AMHR2Q16671 573 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms