RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SULT1E1P49888 294 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 GALK1P51570 392 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 UBXN2BQ14CS0 331 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 PON2Q15165 354 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 ASTE1Q2TB18 679 aaPredicted RBP27.95■■■□□ 2.06
SSU72-201ENST00000291386 ZC3H12AQ5D1E8 599 aaKnown RBP27.95■■■□□ 2.06
SSU72-201ENST00000291386 PLEKHA7Q6IQ23 1121 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 DNAJC24Q6P3W2 148 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 ETFBKMTQ8IXQ9 262 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 EMC1Q8N766 993 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 TC2NQ8N9U0 490 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 JOSD2Q8TAC2 188 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 CD101Q93033 1021 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 CLDN23Q96B33 292 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 TRIM11Q96F44 468 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 P2RY13Q9BPV8 354 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 CALCOCO1Q9P1Z2 691 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 KMT2EQ8IZD2 1858 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 ZDBF2Q9HCK1 2354 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 PI15O43692 258 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 PENKP01210 267 aaPredicted RBP27.94■■■□□ 2.06
SSU72-201ENST00000291386 MYBL1P10243 752 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 EIF4A3P38919 411 aaKnown RBP27.94■■■□□ 2.06
SSU72-201ENST00000291386 PTPN9P43378 593 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 TPGS1Q6ZTW0 290 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 RXFP2Q8WXD0 754 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 BTN2A3PQ96KV6 586 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 TBCBQ99426 244 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 DLGAP2Q9P1A6 1054 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 KIAA1549LQ6ZVL6 1849 aa27.94■■■□□ 2.06
SSU72-201ENST00000291386 CHRNB1P11230 501 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 PDGFRAP16234 1089 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 TFE3P19532 575 aaPredicted RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 CDC25BP30305 580 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 AVPR2P30518 371 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 RFC1P35251 1148 aaPredicted RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 MAGEA9P43362 315 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 RPS9P46781 194 aaKnown RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 CXCR3P49682 368 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 NME3Q13232 169 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 ANO4Q32M45 955 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 FAM133BQ5BKY9 247 aaKnown RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 DGKKQ5KSL6 1271 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 BRMS1LQ5PSV4 323 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 FYB2Q5VWT5 728 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 ALKBH5Q6P6C2 394 aaKnown RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 TMEM105Q8N8V8 129 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 ATP6V0D2Q8N8Y2 350 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 CFAP57Q96MR6 1250 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 DDX50Q9BQ39 737 aaKnown RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 BBS2Q9BXC9 721 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 PIGVQ9NUD9 493 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 PARVAQ9NVD7 372 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 SLC12A6Q9UHW9 1150 aa27.93■■■□□ 2.06
SSU72-201ENST00000291386 NDRG2Q9UN36 371 aaKnown RBP27.93■■■□□ 2.06
SSU72-201ENST00000291386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.92■■■□□ 2.06
SSU72-201ENST00000291386 CACNG3O60359 315 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 GJB6O95452 261 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 TYRP14679 529 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 DRD1P21728 446 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 SDC4P31431 198 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 DEUP1Q05D60 604 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 GRSF1Q12849 480 aaKnown RBP eCLIP27.92■■■□□ 2.06
SSU72-201ENST00000291386 MAMLD1Q13495 774 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 CCINQ13939 588 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 SLC18A3Q16572 532 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 CCDC14Q49A88 953 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 NADSYN1Q6IA69 706 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 SND1Q7KZF4 910 aaKnown RBP eCLIP27.92■■■□□ 2.06
SSU72-201ENST00000291386 C12orf40Q86WS4 652 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 SYNPOQ8N3V7 929 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 CENPIQ92674 756 aaPredicted RBP27.92■■■□□ 2.06
SSU72-201ENST00000291386 P2RY11Q96G91 374 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 CHP1Q99653 195 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 ARHGEF38Q9NXL2 777 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 FBXO10Q9UK96 956 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 PAXBP1Q9Y5B6 917 aa27.92■■■□□ 2.06
SSU72-201ENST00000291386 SYNJ2BP-COX16A0A087WUM0 186 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 A0A0A0MRY4 1105 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 NEDD8-MDP1E9PL57 170 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 CYBBP04839 570 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 ABCB4P21439 1286 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 GPD1P21695 349 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 RDXP35241 583 aaKnown RBP27.91■■■□□ 2.06
SSU72-201ENST00000291386 NUBP1P53384 320 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 VCPP55072 806 aaKnown RBP27.91■■■□□ 2.06
SSU72-201ENST00000291386 LRRC32Q14392 662 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 MPPE1Q53F39 396 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 NAIF1Q69YI7 327 aaPredicted RBP27.91■■■□□ 2.06
SSU72-201ENST00000291386 FSTL4Q6MZW2 842 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 STRADAQ7RTN6 431 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 DNAAF5Q86Y56 855 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 XPO6Q96QU8 1125 aaKnown RBP27.91■■■□□ 2.06
SSU72-201ENST00000291386 FBRSL1Q9HCM7 1045 aaKnown RBP27.91■■■□□ 2.06
SSU72-201ENST00000291386 COX16Q9P0S2 106 aa27.91■■■□□ 2.06
SSU72-201ENST00000291386 CNOT8Q9UFF9 292 aaKnown RBP27.91■■■□□ 2.06
SSU72-201ENST00000291386 ADCY5O95622 1261 aa27.9■■■□□ 2.06
SSU72-201ENST00000291386 SLC6A4P31645 630 aa27.9■■■□□ 2.06
SSU72-201ENST00000291386 SLC6A11P48066 632 aa27.9■■■□□ 2.06
SSU72-201ENST00000291386 ZNF143P52747 638 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 497.9 ms