RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 AZIN2Q96A70 460 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 PLD4Q96BZ4 506 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RBM41Q96IZ5 413 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TLR10Q9BXR5 811 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 CCDC68Q9H2F9 335 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SPTAN1Q13813 2472 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 OAS1P00973 400 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 IGLV3-27P01718 113 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 F11P03951 625 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 NUMBP49757 651 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 PEX5P50542 639 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 PPP2R5EQ16537 467 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 BOLA3Q53S33 107 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 LLGL2Q6P1M3 1020 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 EXD1Q8NHP7 514 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 FAM172AQ8WUF8 416 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF512Q96ME7 567 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF576Q9H609 170 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ANAPC1Q9H1A4 1944 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF840PA6NDX5 716 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TADA3O75528 432 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 MOCS2O96007 188 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 PTPN2P17706 415 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RWDD2BP57060 319 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TAF10Q12962 218 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 PDK2Q15119 407 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 TAZQ16635 292 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 WHAMMP3Q1A5X7 153 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SPRED2Q7Z698 418 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 DNAJB7Q7Z6W7 309 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 RCOR2Q8IZ40 523 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 CEP112Q8N8E3 955 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 N4BP2L2Q92802 583 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 ASAH2Q9NR71 780 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC8A2Q9UPR5 921 aa8.75□□□□□ -1.01
PTPDC1-201ENST00000288976 IRAK2O43187 625 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 CEP104O60308 925 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF189O75820 626 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 NCAM1P13591 858 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 RARGP13631 454 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 CXCR3P49682 368 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 CCDC6Q16204 474 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 GIPC2Q8TF65 315 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 CFAP57Q96MR6 1250 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 TLE6Q9H808 572 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 USP18Q9UMW8 372 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 NAALADL1Q9UQQ1 740 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 PIK3R2O00459 728 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 PRPSAP2O60256 369 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ATP1A1P05023 1023 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ARSEP51690 589 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 HDAC4P56524 1084 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ITIH3Q06033 890 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ARL13BQ3SXY8 428 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 HFE2Q6ZVN8 426 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ARFGAP1Q8N6T3 406 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ACTRT1Q8TDG2 376 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 DQX1Q8TE96 717 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 MAIP1Q8WWC4 291 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 BTBD6Q96KE9 485 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 NAP1L3Q99457 506 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 FRMD8P1Q9BZ68 369 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 DNMT3LQ9UJW3 386 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 FZD10Q9ULW2 581 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 SAR1BQ9Y6B6 198 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF197O14709 1029 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 SOAT2O75908 522 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 FTCDO95954 541 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 RHOXF2BP0C7M4 288 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 HOXB8P17481 243 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 TAF5Q15542 800 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 DCAF6Q58WW2 860 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 HECTD3Q5T447 861 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 CYP4V2Q6ZWL3 525 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 DDX42Q86XP3 938 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 EMC1Q8N766 993 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 VN1R2Q8NFZ6 395 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC39A13Q96H72 371 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 OSBPL9Q96SU4 736 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 RHOXF2Q9BQY4 288 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 TRIM7Q9C029 511 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 NMUR1Q9HB89 426 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 OSER1Q9NX31 292 aa8.74□□□□□ -1.01
PTPDC1-201ENST00000288976 FANCGO15287 622 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 GJB6O95452 261 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 HCAR3P49019 387 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 DPYSL2Q16555 572 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 CDO1Q16878 200 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 PRSS36Q5K4E3 855 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ERMARDQ5T6L9 678 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 SDHAF4Q5VUM1 108 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ADGRD2Q7Z7M1 963 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 TMEM150AQ86TG1 271 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 TAC4Q86UU9 113 aa8.73□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF510Q9Y2H8 683 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms