RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 NNTQ13423 1086 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 ANGPT1Q15389 498 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 FIGNQ5HY92 759 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 E4F1Q66K89 784 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 TRNP1Q6NT89 227 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SLC26A9Q7LBE3 791 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 ARCQ7LC44 396 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 KIAA0907Q7Z7F0 614 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SPEM1Q8N4L4 309 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 CPA6Q8N4T0 437 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 ZBTB44Q8NCP5 570 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 DQX1Q8TE96 717 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SLC20A1Q8WUM9 679 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 MYEOVQ96EZ4 313 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 PPP1R13BQ96KQ4 1090 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 FCRL2Q96LA5 508 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 P2RY13Q9BPV8 354 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 IER2Q9BTL4 223 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 MIS12Q9H081 205 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NLRC4Q9NPP4 1024 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 AIPL1Q9NZN9 384 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 TMEM59LQ9UK28 342 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 FBXO4Q9UKT5 387 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 CLEC4EQ9ULY5 219 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 MYO6Q9UM54 1294 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NDRG2Q9UN36 371 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 STARD13Q9Y3M8 1113 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 PTPRZ1P23471 2315 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 KCNU1A8MYU2 1149 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NCAM2O15394 837 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 CACNG3O60359 315 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 ENDOD1O94919 500 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 LSM8O95777 96 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 LATS1O95835 1130 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 MMP8P22894 467 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SCNN1AP37088 669 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 USP8P40818 1118 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 COPS2P61201 443 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 YWHAZP63104 245 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 RAPGEF1Q13905 1077 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 FAM133BQ5BKY9 247 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 FKBP15Q5T1M5 1219 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 BTBD8Q5XKL5 378 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NADSYN1Q6IA69 706 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 TADA2BQ86TJ2 420 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 ZNF677Q86XU0 584 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 XYLT1Q86Y38 959 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 MIB1Q86YT6 1006 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 PASD1Q8IV76 773 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 FMNL3Q8IVF7 1028 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SIX6OS1Q8N1H7 587 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 C1orf131Q8NDD1 294 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 CD101Q93033 1021 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 PLD4Q96BZ4 506 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 NPY6RQ99463 290 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 EDEM3Q9BZQ6 932 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 OLA1Q9NTK5 396 aaKnown RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 POLR3BQ9NW08 1133 aaPredicted RBP9.56□□□□□ -0.88
HMGN1-201ENST00000288344 SLC27A6Q9Y2P4 619 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
HMGN1-201ENST00000288344 EML5Q05BV3 1969 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SLC12A8A0AV02 714 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SART1O43290 800 aaKnown RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 MSI1O43347 362 aaKnown RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 TULP3O75386 442 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 GFPT2O94808 682 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 ADH5P11766 374 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 HNRNPLP14866 589 aaKnown RBP eCLIP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 JUNDP17535 347 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 CORO1AP31146 461 aaKnown RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SLC6A4P31645 630 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 KRT9P35527 623 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 PLA2G5P39877 138 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 PRKCIP41743 596 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 STAT1P42224 750 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 GSCP56915 257 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 ZNF445P59923 1031 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 FANCCQ00597 558 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SATB1Q01826 763 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SLC6A3Q01959 620 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 GAD2Q05329 585 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 NR1H3Q13133 447 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 ENPP2Q13822 863 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 FBXO43Q4G163 708 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 ADGRF1Q5T601 910 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 EMC10Q5UCC4 262 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 TMEM215Q68D42 235 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 LRSAM1Q6UWE0 723 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 FAM183BPQ6ZVS7 135 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 TAC4Q86UU9 113 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 ZDHHC17Q8IUH5 632 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 TMEM35BQ8NCS4 154 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SLC30A5Q8TAD4 765 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 PGAP3Q96FM1 320 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 PRMT1Q99873 361 aaKnown RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-201ENST00000288344 DCLK3Q9C098 648 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms