RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ACSL4O60488 711 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 MOCS2O96007 188 aaPredicted RBP20.65■□□□□ 0.9
TIMP4-201ENST00000287814 KRT3P12035 628 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 SLC6A4P31645 630 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 RFC1P35251 1148 aaPredicted RBP20.65■□□□□ 0.9
TIMP4-201ENST00000287814 CHKAP35790 457 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 SULT1E1P49888 294 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 ATXN1P54253 815 aaKnown RBP20.65■□□□□ 0.9
TIMP4-201ENST00000287814 AMPD2Q01433 879 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 SLC25A52Q3SY17 297 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 RAB6CQ53S08 254 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 FAM133BQ5BKY9 247 aaKnown RBP20.65■□□□□ 0.9
TIMP4-201ENST00000287814 ADGRF1Q5T601 910 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 DRC7Q8IY82 874 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 RXFP2Q8WXD0 754 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 CD101Q93033 1021 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 CLDN23Q96B33 292 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 MYEOVQ96EZ4 313 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 CHP1Q99653 195 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 RAB6CQ9H0N0 254 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 ISCUQ9H1K1 167 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 LMAN1LQ9HAT1 526 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
TIMP4-201ENST00000287814 ANTXRLA6NF34 631 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 C2CD4BA6NLJ0 364 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 SIGLEC16A6NMB1 481 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 KCNU1A8MYU2 1149 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 ATMINO43313 823 aaPredicted RBP20.64■□□□□ 0.9
TIMP4-201ENST00000287814 TSPAN3O60637 253 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 RTN2O75298 545 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 LATS1O95835 1130 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 TYRP14679 529 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 EIF4A3P38919 411 aaKnown RBP20.64■□□□□ 0.9
TIMP4-201ENST00000287814 CCINQ13939 588 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 CCDC14Q49A88 953 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 PPP1R15BQ5SWA1 713 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 FYB2Q5VWT5 728 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 RFWD3Q6PCD5 774 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 BNIPLQ7Z465 357 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 SFTPA1Q8IWL2 248 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 AZIN2Q96A70 460 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 PGAP3Q96FM1 320 aaPredicted RBP20.64■□□□□ 0.9
TIMP4-201ENST00000287814 VCPIP1Q96JH7 1222 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 ANLNQ9NQW6 1124 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.64■□□□□ 0.9
TIMP4-201ENST00000287814 RRN3Q9NYV6 651 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 STAP1Q9ULZ2 295 aa20.64■□□□□ 0.9
TIMP4-201ENST00000287814 AKR1B15C9JRZ8 316 aaPredicted RBP20.64■□□□□ 0.89
TIMP4-201ENST00000287814 EGFP01133 1207 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 PENKP01210 267 aaPredicted RBP20.64■□□□□ 0.89
TIMP4-201ENST00000287814 TPM1P09493 284 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 PDGFRAP16234 1089 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 GBP1P32455 592 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 SLC11A2P49281 568 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 SGSHP51688 502 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 RPL7AP62424 266 aaKnown RBP20.64■□□□□ 0.89
TIMP4-201ENST00000287814 SH3PXD2AQ5TCZ1 1133 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 TC2NQ8N9U0 490 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 SELENOOQ9BVL4 669 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 CLEC4EQ9ULY5 219 aa20.64■□□□□ 0.89
TIMP4-201ENST00000287814 I6L893 689 aaPredicted RBP20.63■□□□□ 0.89
TIMP4-201ENST00000287814 TULP3O75386 442 aa20.63■□□□□ 0.89
TIMP4-201ENST00000287814 CCR1P32246 355 aa20.63■□□□□ 0.89
TIMP4-201ENST00000287814 ATP11AP98196 1134 aa20.63■□□□□ 0.89
TIMP4-201ENST00000287814 C15orf59Q2T9L4 293 aaPredicted RBP20.63■□□□□ 0.89
TIMP4-201ENST00000287814 ASTE1Q2TB18 679 aaPredicted RBP20.63■□□□□ 0.89
TIMP4-201ENST00000287814 DNAJC24Q6P3W2 148 aa20.63■□□□□ 0.89
TIMP4-201ENST00000287814 PHTF2Q8N3S3 785 aa20.63■□□□□ 0.89
TIMP4-201ENST00000287814 NENFQ9UMX5 172 aa20.63■□□□□ 0.89
TIMP4-201ENST00000287814 CACNG3O60359 315 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 APOEP02649 317 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 CXCR3P49682 368 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 DEUP1Q05D60 604 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 GRSF1Q12849 480 aaKnown RBP eCLIP20.62■□□□□ 0.89
TIMP4-201ENST00000287814 MAMLD1Q13495 774 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 GAS6Q14393 721 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 PPP2R5DQ14738 602 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 PLEKHA7Q6IQ23 1121 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 PPP1R2P3Q6NXS1 205 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 Q6ZS52 159 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 CNGA4Q8IV77 575 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 RNF34Q969K3 372 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 BTN2A3PQ96KV6 586 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 MCEEQ96PE7 176 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 ZNF318Q5VUA4 2279 aa20.62■□□□□ 0.89
TIMP4-201ENST00000287814 ENDOD1O94919 500 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 ADCY5O95622 1261 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 EIF2DP41214 584 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 GFPT1Q06210 699 aaPredicted RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 MAPK8IP2Q13387 824 aaPredicted RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 PIK3R6Q5UE93 754 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 ALKBH5Q6P6C2 394 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 VPS36Q86VN1 386 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 DDI1Q8WTU0 396 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 PRICKLE1Q96MT3 831 aaPredicted RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 PNKPQ96T60 521 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 TMPRSS4Q9NRS4 437 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 ZNHIT6Q9NWK9 470 aaKnown RBP20.61■□□□□ 0.89
TIMP4-201ENST00000287814 FBXO10Q9UK96 956 aa20.61■□□□□ 0.89
TIMP4-201ENST00000287814 K7EQS6 105 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms