RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 MPP5Q8N3R9 675 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 METTL25Q8N6Q8 603 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 CCDC28BQ9BUN5 200 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 POPDC2Q9HBU9 364 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 TBC1D22BQ9NU19 505 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 UBAP1Q9NZ09 502 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 IL1RAPL1Q9NZN1 696 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 DNAJB4Q9UDY4 337 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 ZC3H7BQ9UGR2 993 aaKnown RBP11.71□□□□□ -0.53
SCLT1-201ENST00000281142 CNTN6Q9UQ52 1028 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 F5H423 210 aaPredicted RBP11.71□□□□□ -0.53
SCLT1-201ENST00000281142 PIK3R2O00459 728 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 STAM2O75886 525 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 OATP04181 439 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 ATP6V1B1P15313 513 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 ARRB2P32121 409 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 MYL6P60660 151 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 FOLH1Q04609 750 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 NME8Q8N427 588 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 PNPOQ9NVS9 261 aa11.71□□□□□ -0.53
SCLT1-201ENST00000281142 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.54
SCLT1-201ENST00000281142 CCDC160A6NGH7 325 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 MCF2LO15068 1137 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 STRNO43815 780 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 KRT37O76014 449 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 KRT3P12035 628 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 AOC1P19801 751 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 ARHGEF16Q5VV41 709 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 DUS1LQ6P1R4 473 aaKnown RBP11.71□□□□□ -0.54
SCLT1-201ENST00000281142 TMC7Q7Z402 723 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 CAND1Q86VP6 1230 aaKnown RBP11.71□□□□□ -0.54
SCLT1-201ENST00000281142 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 PHTF2Q8N3S3 785 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 TMEM35BQ8NCS4 154 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 PEBP4Q96S96 227 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 MAF1Q9H063 256 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 CISHQ9NSE2 258 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 CDH22Q9UJ99 828 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 POMPQ9Y244 141 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 INPP5FQ9Y2H2 1132 aa11.71□□□□□ -0.54
SCLT1-201ENST00000281142 CNTNAP2Q9UHC6 1331 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 KIAA1217Q5T5P2 1943 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 A0A0J9YVX5 310 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 H3BNX3 289 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 H7C0C1 242 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 GSRP00390 522 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MIPP30301 263 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MSX2P35548 267 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-201ENST00000281142 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 ATP5OP48047 213 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 CHN2P52757 468 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 HPCAP84074 193 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 SP3Q02447 781 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 BTKQ06187 659 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 FASTKD1Q53R41 847 aaKnown RBP11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MORN1Q5T089 497 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 UBR7Q8N806 425 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 PDCD2LQ9BRP1 358 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MSTO1Q9BUK6 570 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 GRIP2Q9C0E4 1043 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 AK5Q9Y6K8 562 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 A0A1B0GTW7 788 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 APOC4-APOC2K7ER74 178 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 SIN3BO75182 1162 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 APOC2P02655 101 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 TFAP2AP05549 437 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 GRIA1P42261 906 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 ROR1Q01973 937 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MPP3Q13368 585 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 ANKRD20A4Q4UJ75 823 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 PPP6R3Q5H9R7 873 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-201ENST00000281142 AAGABQ6PD74 315 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 FRMD7Q6ZUT3 714 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 CCDC60Q8IWA6 550 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-201ENST00000281142 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 PPP1R14CQ8TAE6 165 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
SCLT1-201ENST00000281142 IMPG2Q9BZV3 1241 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MTMR12Q9C0I1 747 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 MIS12Q9H081 205 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 C1orf21Q9H246 121 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 USP29Q9HBJ7 922 aa11.7□□□□□ -0.54
SCLT1-201ENST00000281142 SF3B1O75533 1304 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■■■■ 152.9
SCLT1-201ENST00000281142 LRRIQ4A6NIV6 560 aa11.69□□□□□ -0.54
SCLT1-201ENST00000281142 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
SCLT1-201ENST00000281142 APRTP07741 180 aa11.69□□□□□ -0.54
SCLT1-201ENST00000281142 F7P08709 466 aaPredicted RBP11.69□□□□□ -0.54
SCLT1-201ENST00000281142 ITGAXP20702 1163 aa11.69□□□□□ -0.54
SCLT1-201ENST00000281142 TBXAS1P24557 533 aaPredicted RBP11.69□□□□□ -0.54
SCLT1-201ENST00000281142 JAK3P52333 1124 aa11.69□□□□□ -0.54
SCLT1-201ENST00000281142 COPAP53621 1224 aa11.69□□□□□ -0.54
SCLT1-201ENST00000281142 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
SCLT1-201ENST00000281142 TBL3Q12788 808 aaKnown RBP11.69□□□□□ -0.54
SCLT1-201ENST00000281142 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
SCLT1-201ENST00000281142 TEDDM1Q5T9Z0 273 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms