RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FOXR1Q6PIV2 292 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 ANKS3Q6ZW76 656 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 CROCCP2Q86T23 111 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 ARFGAP2Q8N6H7 521 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 TMEM169Q96HH4 297 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 POPDC2Q9HBU9 364 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 CSNK1G1Q9HCP0 422 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 PIGVQ9NUD9 493 aa21.72■■□□□ 1.07
YBX3-202ENST00000279550 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.72■■□□□ 1.07
YBX3-202ENST00000279550 OR6C75A6NL08 312 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 M0QYT0 321 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 AGTP01019 485 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 OR4Q2P0C623 313 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 GOT1P17174 413 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 AMPD1P23109 780 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 BDNFP23560 247 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 RBL1P28749 1068 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 ZSCAN26Q16670 478 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 MSS51Q4VC12 460 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 FNBP1LQ5T0N5 605 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 CCDC13Q8IYE1 715 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 DCP1BQ8IZD4 617 aaKnown RBP21.71■■□□□ 1.07
YBX3-202ENST00000279550 FIBCD1Q8N539 461 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 RAD9AQ99638 391 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 CNGB3Q9NQW8 809 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 SPG21Q9NZD8 308 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 CTNNAL1Q9UBT7 734 aa21.71■■□□□ 1.07
YBX3-202ENST00000279550 ALOX15BO15296 676 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 STIP1P31948 543 aaKnown RBP21.7■■□□□ 1.06
YBX3-202ENST00000279550 RDXP35241 583 aaKnown RBP21.7■■□□□ 1.06
YBX3-202ENST00000279550 CCDC38Q502W7 563 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 SLC39A12Q504Y0 691 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 C4orf50Q6ZRC1 276 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 CEP128Q6ZU80 1094 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 PCGF5Q86SE9 256 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 CCDC33Q8N5R6 958 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 ADAM32Q8TC27 787 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 PKNOX2Q96KN3 472 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 NLRC5Q86WI3 1866 aa21.7■■□□□ 1.06
YBX3-202ENST00000279550 BCLAF3A2AJT9 711 aaKnown RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 H7C4K7 107 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 NDC80O14777 642 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 KCNN4O15554 427 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 TBC1D4O60343 1298 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 ABHD2P08910 425 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 LINC00271P0C7V0 271 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 LSP1P33241 339 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 DEUP1Q05D60 604 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 PDIA2Q13087 525 aaKnown RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 NME3Q13232 169 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 RASIP1Q5U651 963 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 NCBP2-AS2Q69YL0 99 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 SPATA2LQ8IUW3 424 aaPredicted RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 SLC7A14Q8TBB6 771 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 MDM1Q8TC05 714 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 CLP1Q92989 425 aaKnown RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 RTP4Q96DX8 246 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 SERPINB12Q96P63 405 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 WDR83Q9BRX9 315 aaKnown RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 OXCT2Q9BYC2 517 aaPredicted RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 STAP1Q9ULZ2 295 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 FOXO6A8MYZ6 492 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 TLL1O43897 1013 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 TCEA3O75764 348 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 ZBED1O96006 694 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 LTFP02788 710 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 SOD2P04179 222 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 PPM1AP35813 382 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 BASP1P80723 227 aaKnown RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 PRSS55Q6UWB4 352 aaPredicted RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 ANKMY2Q8IV38 441 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 SP7Q8TDD2 431 aaPredicted RBP21.69■■□□□ 1.06
YBX3-202ENST00000279550 ANLNQ9NQW6 1124 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 PCDHB12Q9Y5F1 795 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 NR2E3Q9Y5X4 410 aa21.69■■□□□ 1.06
YBX3-202ENST00000279550 NFE2Q16621 373 aaPredicted RBP21.68■■□□□ 1.06
YBX3-202ENST00000279550 HIF1AQ16665 826 aa21.68■■□□□ 1.06
YBX3-202ENST00000279550 KIAA1841Q6NSI8 718 aa21.68■■□□□ 1.06
YBX3-202ENST00000279550 RSPO2Q6UXX9 243 aaPredicted RBP21.68■■□□□ 1.06
YBX3-202ENST00000279550 CENPUQ71F23 418 aa21.68■■□□□ 1.06
YBX3-202ENST00000279550 ZBED8Q8IZ13 594 aa21.68■■□□□ 1.06
YBX3-202ENST00000279550 WDR6Q9NNW5 1121 aaKnown RBP21.68■■□□□ 1.06
YBX3-202ENST00000279550 ARHGEF4Q9NR80 690 aa21.68■■□□□ 1.06
YBX3-202ENST00000279550 COL4A4P53420 1690 aaPredicted RBP21.68■■□□□ 1.06
YBX3-202ENST00000279550 PTPRDP23468 1912 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 A6NNZ2 444 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 I6L893 689 aaPredicted RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 MMP13P45452 471 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 HNRNPH2P55795 449 aaKnown RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 ARL4CP56559 192 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 KCNJ11Q14654 390 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 TUBB8Q3ZCM7 444 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 CAPN12Q6ZSI9 719 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 DDX53Q86TM3 631 aaKnown RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 PSTKQ8IV42 348 aaKnown RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 CYP4X1Q8N118 509 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 RNF139Q8WU17 664 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 EDEM1Q92611 657 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 FUBP3Q96I24 572 aaKnown RBP eCLIP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms