RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 C12orf50Q8NA57 414 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 PDCD6IPQ8WUM4 868 aaKnown RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 C7orf43Q8WVR3 580 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 RCN3Q96D15 328 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 SERPINI1Q99574 410 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 CNPY3Q9BT09 278 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 TMEM216Q9P0N5 145 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 PDP2Q9P2J9 529 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 LNPEPQ9UIQ6 1025 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 BCL9LQ86UU0 1499 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 NCF1BA6NI72 391 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 NCF1CA8MVU1 366 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 NCF1P14598 390 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 CCNB1P14635 433 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 NAMPTP43490 491 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 GMPSP49915 693 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 CDKL3Q8IVW4 592 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 BHLHE22Q8NFJ8 381 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 CCDC134Q9H6E4 229 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 TCF7L2Q9NQB0 619 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 SNX10Q9Y5X0 201 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 PSAT1Q9Y617 370 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 LRP6O75581 1613 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 FAM149AA5PLN7 773 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 CLDN5O00501 218 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 PIGNO95427 931 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 ASS1P00966 412 aaKnown RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 CYP1A1P04798 512 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 ITGAVP06756 1048 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 MPSTP25325 297 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 TGFB2P61812 414 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 FOLH1Q04609 750 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 CTBP1Q13363 440 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 TMEM132BQ14DG7 1078 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 SFT2D3Q587I9 215 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 ADGRD1Q6QNK2 874 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 SCIMPQ6UWF3 145 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 PHF13Q86YI8 300 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 DCAKDQ8WVC6 231 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 LENG8Q96PV6 779 aaPredicted RBP11.73□□□□□ -0.53
SKP2-202ENST00000274255 AGAP2Q99490 1192 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 SNCAIPQ9Y6H5 919 aa11.73□□□□□ -0.53
SKP2-202ENST00000274255 RNF103O00237 685 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 PRPF4O43172 522 aaKnown RBP eCLIP11.72□□□□□ -0.53
SKP2-202ENST00000274255 TYROBPO43914 113 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 TRUB2O95900 331 aaKnown RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 HMBSP08397 361 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 GCAP28676 217 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 PTGER2P43116 358 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 CSHL1Q14406 222 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 C16orf72Q14CZ0 275 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 CWF19L1Q69YN2 538 aaKnown RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 TAS1R3Q7RTX0 852 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 SLC44A1Q8WWI5 657 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 THAP1Q9NVV9 213 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 STX18Q9P2W9 335 aaKnown RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 PLLPQ9Y342 182 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 BNIP3LO60238 219 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 RNASEH1O60930 286 aaKnown RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 KLHL2O95198 593 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 CHRNGP07510 517 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 ZBTB48P10074 688 aaPredicted RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 ACO1P21399 889 aaKnown RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 USP46P62068 366 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 ZNF252P-AS1Q0IIN9 211 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 KLF1Q13351 362 aaPredicted RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 AGKQ53H12 422 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 CERCAMQ5T4B2 595 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 DHDDSQ86SQ9 333 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 SCN4BQ8IWT1 228 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 CDC26Q8NHZ8 85 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 MFSD3Q96ES6 412 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 RNF157Q96PX1 679 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 ELOVL4Q9GZR5 314 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 HAPLN2Q9GZV7 340 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 DPP3Q9NY33 737 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 SNTG2Q9NY99 539 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 FAM8A1Q9UBU6 413 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 ACTL7BQ9Y614 415 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 UBA6A0AVT1 1052 aaPredicted RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 SDR42E2A6NKP2 422 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 SIGLEC16A6NMB1 481 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 POLBP06746 335 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 CTSHP09668 335 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 UBA1P22314 1058 aaKnown RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 OTUD3Q5T2D3 398 aaPredicted RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 PPP1R26Q5T8A7 1209 aaPredicted RBP11.72□□□□□ -0.53
SKP2-202ENST00000274255 DEFB132Q7Z7B7 95 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 DPP9Q86TI2 863 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 TP53INP2Q8IXH6 220 aa11.72□□□□□ -0.53
SKP2-202ENST00000274255 MYO1HQ8N1T3 1032 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms