RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PCDHAC1Q9H158 963 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 SEL1LQ9UBV2 794 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 SSX2IPQ9Y2D8 614 aa13.21□□□□□ -0.29
HERC6-202ENST00000273960 ASTN2O75129 1339 aaPredicted RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 CKMT2P17540 419 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 RFC1P35251 1148 aaPredicted RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 GRIA1P42261 906 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 WNT7BP56706 349 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 C21orf59P57076 290 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 MAVSQ7Z434 540 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 LDHDQ86WU2 507 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 BBS5Q8N3I7 341 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.21□□□□□ -0.3
HERC6-202ENST00000273960 PCDH20Q8N6Y1 951 aaKnown RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 DQX1Q8TE96 717 aaKnown RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 CMTM5Q96DZ9 223 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 OSBPL6Q9BZF3 934 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 NAA50Q9GZZ1 169 aaKnown RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 PARVAQ9NVD7 372 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 THEGQ9P2T0 379 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 IP6K2Q9UHH9 426 aa13.21□□□□□ -0.3
HERC6-202ENST00000273960 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.3
HERC6-202ENST00000273960 C1orf232A0A0U1RR37 186 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 SH3PXD2BA1X283 911 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 FUOMA2VDF0 154 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 A6NL46 340 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 KCNN4O15554 427 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 GRAP2O75791 330 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 KLHL2O95198 593 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 OXSR1O95747 527 aaPredicted RBP13.2□□□□□ -0.3
HERC6-202ENST00000273960 CDKN2BP42772 138 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 NOMO3P69849 1222 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 CYP2A13Q16696 494 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 Q3C1V9 767 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 SCYL2Q6P3W7 929 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 KBTBD6Q86V97 674 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 CASP10Q92851 521 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 RCN3Q96D15 328 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 BTBD9Q96Q07 612 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 THAP1Q9NVV9 213 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 GPATCH2LQ9NWQ4 482 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 CCDC78A2IDD5 438 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 MCF2LO15068 1137 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 SERPINB7O75635 380 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 RFPL1O75677 317 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 CD247P20963 164 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 IL1R2P27930 398 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 GTF2A2P52657 109 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 SLC18A2Q05940 514 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 NEDD8Q15843 81 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 SLC9B1Q4ZJI4 515 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 TEX44Q53QW1 395 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 FAM47BQ8NA70 645 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 ACTRT2Q8TDY3 377 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 JADE3Q92613 823 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 KCNK16Q96T55 309 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 TCHPQ9BT92 498 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 IDI2Q9BXS1 227 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 NDEL1Q9GZM8 345 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 TUFT1Q9NNX1 390 aa13.2□□□□□ -0.3
HERC6-202ENST00000273960 MYO18AQ92614 2054 aaKnown RBP13.2□□□□□ -0.3
HERC6-202ENST00000273960 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 SAC3D1A6NKF1 404 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 CASQ2O14958 399 aaPredicted RBP13.19□□□□□ -0.3
HERC6-202ENST00000273960 P4HA2O15460 535 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 PSMD10O75832 226 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 AOC1P19801 751 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 YAP1P46937 504 aaKnown RBP13.19□□□□□ -0.3
HERC6-202ENST00000273960 PHEXP78562 749 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 RAB6CQ53S08 254 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 SLC2A7Q6PXP3 512 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 CENPSQ8N2Z9 138 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 DDHD1Q8NEL9 900 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 LRTOMTQ8WZ04 291 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
HERC6-202ENST00000273960 COX4I2Q96KJ9 171 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 TEKT3Q9BXF9 490 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 RAB6CQ9H0N0 254 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 SSU72Q9NP77 194 aaKnown RBP13.19□□□□□ -0.3
HERC6-202ENST00000273960 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 ZHX2Q9Y6X8 837 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 MYH9P35579 1960 aaKnown RBP13.19□□□□□ -0.3
HERC6-202ENST00000273960 ANKRD12Q6UB98 2062 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 TBX3O15119 743 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 HSPA4LO95757 839 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 UGT1A6P19224 532 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 UGT1A1P22309 533 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 UGT1A4P22310 534 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 ADORA2AP29274 412 aa13.19□□□□□ -0.3
HERC6-202ENST00000273960 UGT1A3P35503 534 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms