RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 DAPK2Q9UIK4 370 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 TRHDEQ9UKU6 1024 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 RAD51BO15315 384 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ATG7O95352 703 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 BGNP21810 368 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 TPP2P29144 1249 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 C21orf59P57076 290 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CDC16Q13042 620 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MPZL3Q6UWV2 235 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 GMCL1P1Q8NEA9 526 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ACTRT2Q8TDY3 377 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 WDR60Q8WVS4 1066 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 NMD3Q96D46 503 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 DCLK3Q9C098 648 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ZCCHC18P0CG32 403 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PCNAP12004 261 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 LHX1P48742 406 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 N4BP2L1Q5TBK1 243 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PADI4Q9UM07 663 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MAP1BP46821 2468 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ERVK-10P10266 1014 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 RPL10AP62906 217 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 BAATQ14032 418 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 NFIL3Q16649 462 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 TMC3Q7Z5M5 1100 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 YTHDF3Q7Z739 585 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MYDGFQ969H8 173 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CENPTQ96BT3 561 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 OMA1Q96E52 524 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 COLEC11Q9BWP8 271 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 SLC39A8Q9C0K1 460 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PRDM5Q9NQX1 630 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 IARS2Q9NSE4 1012 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CCDC154A6NI56 674 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 WWP2O00308 870 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 STAU1O95793 577 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PLEKP08567 350 aaPredicted RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CD151P48509 253 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 IL5RAQ01344 420 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 BST2Q10589 180 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 DDI2Q5TDH0 399 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 KLHL17Q6TDP4 642 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 FAM228AQ86W67 206 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PALB2Q86YC2 1186 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 C17orf102A2RUQ5 167 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 BAIAP3O94812 1187 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 YWHAZP63104 245 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 MPP3Q13368 585 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF284Q2VY69 593 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 C11orf96Q7Z7L8 435 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 ZCCHC9Q8N567 271 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 CCDC33Q8N5R6 958 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 OR56A4Q8NGH8 313 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 AENQ8WTP8 325 aaKnown RBP8.17□□□□□ -1.1
LIMD1-201ENST00000273317 FICDQ9BVA6 458 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 VPS51Q9UID3 782 aa8.17□□□□□ -1.1
LIMD1-201ENST00000273317 PCP4L1A6NKN8 68 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ZW10O43264 779 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TBC1D12O60347 775 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 LRG1P02750 347 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CYP2A7P20853 494 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 RASA1P20936 1047 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 PDIA6Q15084 440 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 KRT77Q7Z794 578 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FAM172AQ8WUF8 416 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FAM118BQ9BPY3 351 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TMEM216Q9P0N5 145 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 GGA2Q9UJY4 613 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CARNS1A5YM72 827 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TRDMT1O14717 391 aaKnown RBP8.16□□□□□ -1.1
LIMD1-201ENST00000273317 STAG3L1P0CL83 205 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CCNA2P20248 432 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 YWHAQP27348 245 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 PSMB9P28065 219 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ANTXR2P58335 489 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 GNA13Q14344 377 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CDKAL1Q5VV42 579 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 NET1Q7Z628 596 aaPredicted RBP8.16□□□□□ -1.1
LIMD1-201ENST00000273317 EXOC3L1Q86VI1 746 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 PI4K2AQ9BTU6 479 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 RAD18Q9NS91 495 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CRNNQ9UBG3 495 aaPredicted RBP8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ADAM28Q9UKQ2 775 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 EFCAB10A6NFE3 127 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 M0QYT0 321 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 HPGDP15428 266 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CDH17Q12864 832 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FASTKQ14296 549 aaKnown RBP8.16□□□□□ -1.1
LIMD1-201ENST00000273317 KBTBD8Q8NFY9 601 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 MIEF1Q9NQG6 463 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 CLOCKO15516 846 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ERVK-24P63145 666 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TRAF3Q13114 568 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 KIAA0408Q6ZU52 694 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 FBXO32Q969P5 355 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 TPST1O60507 370 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 KLHL18O94889 574 aa8.16□□□□□ -1.1
LIMD1-201ENST00000273317 ITGB3P05106 788 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms