RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TASP1Q9H6P5 420 aa10.41□□□□□ -0.74
LRTM1-201ENST00000273286 KIF9Q9HAQ2 790 aa10.41□□□□□ -0.74
LRTM1-201ENST00000273286 SEL1LQ9UBV2 794 aa10.41□□□□□ -0.74
LRTM1-201ENST00000273286 STYXL1Q9Y6J8 313 aa10.41□□□□□ -0.74
LRTM1-201ENST00000273286 NUP210Q8TEM1 1887 aaPredicted RBP10.4□□□□□ -0.74
LRTM1-201ENST00000273286 CCDC163A0A0D9SF12 145 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 SPECC1L-ADORA2AF8WAN1 911 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 IL18RAPO95256 599 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 VNN2O95498 520 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 OR4Q2P0C623 313 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 DDX6P26196 483 aaKnown RBP eCLIP10.4□□□□□ -0.75
LRTM1-201ENST00000273286 GJB2P29033 226 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 ZNF165P49910 485 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 SIM2Q14190 667 aaPredicted RBP10.4□□□□□ -0.75
LRTM1-201ENST00000273286 MGAT5BQ3V5L5 792 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 SV2CQ496J9 727 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 SLC39A12Q504Y0 691 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 GPR158Q5T848 1215 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 ADALQ6DHV7 355 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 JADE1Q6IE81 842 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 GAREM2Q75VX8 874 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 DCP1BQ8IZD4 617 aaKnown RBP10.4□□□□□ -0.75
LRTM1-201ENST00000273286 ATAD1Q8NBU5 361 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 DDX1Q92499 740 aaKnown RBP10.4□□□□□ -0.75
LRTM1-201ENST00000273286 RAD54LQ92698 747 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 NKD1Q969G9 470 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 TMX3Q96JJ7 454 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 ZNF560Q96MR9 790 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 SEPT5Q99719 369 aaPredicted RBP10.4□□□□□ -0.75
LRTM1-201ENST00000273286 ZHX3Q9H4I2 956 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 AGO2Q9UKV8 859 aaKnown RBP10.4□□□□□ -0.75
LRTM1-201ENST00000273286 EXOC7Q9UPT5 735 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.75
LRTM1-201ENST00000273286 NPHP3-ACAD11A0A0J9YXS1 232 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 SLC38A8A6NNN8 435 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 ATG13O75143 517 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 PRAMEF1O95521 474 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 LDHAP00338 332 aaKnown RBP10.39□□□□□ -0.75
LRTM1-201ENST00000273286 DDIT3P35638 169 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 AVPR1AP37288 418 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 CCNFP41002 786 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 ATXN1P54253 815 aaKnown RBP10.39□□□□□ -0.75
LRTM1-201ENST00000273286 NFE2Q16621 373 aaPredicted RBP10.39□□□□□ -0.75
LRTM1-201ENST00000273286 ITPRIPL2Q3MIP1 535 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
LRTM1-201ENST00000273286 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.39□□□□□ -0.75
LRTM1-201ENST00000273286 SPATA18Q8TC71 538 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 ZCWPW1Q9H0M4 648 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 BLOC1S4Q9NUP1 217 aa10.39□□□□□ -0.75
LRTM1-201ENST00000273286 SPTBN2O15020 2390 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 ACACBO00763 2458 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 CYB561D2O14569 222 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 SYPP08247 313 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 PDCP20941 246 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 TGM1P22735 817 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 TSPY1Q01534 308 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 SATB1Q01826 763 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 BFSP1Q12934 665 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 ALCAMQ13740 583 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 DHX8Q14562 1220 aaKnown RBP10.38□□□□□ -0.75
LRTM1-201ENST00000273286 CSRP2Q16527 193 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 CMTM8Q8IZV2 173 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 TMEM86AQ8N2M4 240 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 OR10T2Q8NGX3 314 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 LEO1Q8WVC0 666 aaPredicted RBP10.38□□□□□ -0.75
LRTM1-201ENST00000273286 POMGNT1Q8WZA1 660 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 LOXL4Q96JB6 756 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 MAP6Q96JE9 813 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 FIZ1Q96SL8 496 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 PYM1Q9BRP8 204 aaKnown RBP10.38□□□□□ -0.75
LRTM1-201ENST00000273286 NT5C1AQ9BXI3 368 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 PRDM14Q9GZV8 571 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 DPP3Q9NY33 737 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 UXTQ9UBK9 157 aaPredicted RBP10.38□□□□□ -0.75
LRTM1-201ENST00000273286 EPG5Q9HCE0 2579 aa10.38□□□□□ -0.75
LRTM1-201ENST00000273286 NCANO14594 1321 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 TSC2P49815 1807 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 MYOCOSA0A1B0GUC4 107 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 K7ESF4 209 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 PPEF2O14830 753 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 SLC30A4O14863 429 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 SIGLEC6O43699 453 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 CSH1P0DML2 217 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 CSH2P0DML3 217 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 NME1P15531 152 aaKnown RBP10.37□□□□□ -0.75
LRTM1-201ENST00000273286 GAP43P17677 238 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 ATF6P18850 670 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 ACOT2P49753 483 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 GUCY2FP51841 1108 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 LINC00310P59036 64 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 GRSF1Q12849 480 aaKnown RBP eCLIP10.37□□□□□ -0.75
LRTM1-201ENST00000273286 KARSQ15046 597 aaKnown RBP10.37□□□□□ -0.75
LRTM1-201ENST00000273286 BBS9Q3SYG4 887 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 FBXO43Q4G163 708 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 STXBP5Q5T5C0 1151 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 SLC39A4Q6P5W5 647 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 ZNF720Q7Z2F6 126 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 WDR5BQ86VZ2 330 aa10.37□□□□□ -0.75
LRTM1-201ENST00000273286 SLITRK4Q8IW52 837 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms