RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SCML2Q9UQR0 700 aa15.92■□□□□ 0.14
COPS3-201ENST00000268717 BACE2Q9Y5Z0 518 aa15.92■□□□□ 0.14
COPS3-201ENST00000268717 FAM92AA1XBS5 289 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 H3BQF6 201 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 H3BRJ5 948 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 OR4Q2P0C623 313 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 RBP3P10745 1247 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 OAS2P29728 719 aaKnown RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 ADRA1BP35368 520 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 GGCXP38435 758 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 HCAR3P49019 387 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 ITGA8P53708 1063 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 PITX1P78337 314 aaPredicted RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 EIF4EBP2Q13542 120 aaPredicted RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 UAP1Q16222 522 aaPredicted RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 PPP6R3Q5H9R7 873 aaPredicted RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 HIBCHQ6NVY1 386 aaPredicted RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 PCGF5Q86SE9 256 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 CEP57Q86XR8 500 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 RELL1Q8IUW5 271 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 NUP93Q8N1F7 819 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 GOLGA6L1Q8N7Z2 621 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 SPATA17Q96L03 361 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 ZIM3Q96PE6 472 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 TMEM121Q9BTD3 319 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 PHACTR1Q9C0D0 580 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 PABPC3Q9H361 631 aaKnown RBP15.91■□□□□ 0.14
COPS3-201ENST00000268717 DDIT4Q9NX09 232 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 ANAPC5Q9UJX4 755 aa15.91■□□□□ 0.14
COPS3-201ENST00000268717 BCLAF3A2AJT9 711 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 SGK1O00141 431 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 GRM6O15303 877 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 SYF2O95926 243 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 NUDT17P0C025 328 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 EIF3BP55884 814 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 YWHAGP61981 247 aaKnown RBP eCLIP15.9■□□□□ 0.14
COPS3-201ENST00000268717 SEMA3BQ13214 749 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 MORF4L2Q15014 288 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 USP41Q3LFD5 358 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 RTP2Q5QGT7 225 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 SPOUT1Q5T280 376 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 IZUMO3Q5VZ72 239 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 SLC8B1Q6J4K2 584 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 TRMT10CQ7L0Y3 403 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 MON1AQ86VX9 555 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 RSAD2Q8WXG1 361 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 IGSF21Q96ID5 467 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 LMAN2LQ9H0V9 348 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 FAM204AQ9H8W3 233 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 AAASQ9NRG9 546 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 CWC15Q9P013 229 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 SAE1Q9UBE0 346 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 SHOC2Q9UQ13 582 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 MTMR11A4FU01 709 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 GOLGA8KD6RF30 607 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 RTN3O95197 1032 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 PMS2P54278 862 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 NME3Q13232 169 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 TRIP13Q15645 432 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 P3H1Q32P28 736 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 BRMS1LQ5PSV4 323 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 C4orf22Q6V702 233 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 HOOK3Q86VS8 718 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 TMEM173Q86WV6 379 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 CDKL3Q8IVW4 592 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 KLHL23Q8NBE8 558 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 SCAMP5Q8TAC9 235 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 DQX1Q8TE96 717 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 RNF139Q8WU17 664 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 BCL7CQ8WUZ0 217 aaPredicted RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 SMOC2Q9H3U7 446 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 ALG13Q9NP73 1137 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 THEGQ9P2T0 379 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 HSFX1Q9UBD0 423 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 MTRRQ9UBK8 725 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 TPX2Q9ULW0 747 aaKnown RBP15.9■□□□□ 0.14
COPS3-201ENST00000268717 PCDHB12Q9Y5F1 795 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 RAD54BQ9Y620 910 aa15.9■□□□□ 0.14
COPS3-201ENST00000268717 HACD1B0YJ81 288 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 NT5C1B-RDH14C9J2C7 533 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 CPB1P15086 417 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 LAG3P18627 525 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 HTR7P34969 479 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 PSEN1P49768 467 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 GPS1Q13098 491 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 SKIV2LQ15477 1246 aaKnown RBP15.89■□□□□ 0.13
COPS3-201ENST00000268717 BTBD8Q5XKL5 378 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 MSANTD2Q6P1R3 559 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 TAC4Q86UU9 113 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 SCN4BQ8IWT1 228 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 ZCCHC9Q8N567 271 aaKnown RBP15.89■□□□□ 0.13
COPS3-201ENST00000268717 COLGALT1Q8NBJ5 622 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 ADAM7Q9H2U9 754 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 ARHGEF4Q9NR80 690 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.89■□□□□ 0.13
COPS3-201ENST00000268717 STK39Q9UEW8 545 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 PLAAQ9Y263 795 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 ATP8A1Q9Y2Q0 1164 aa15.89■□□□□ 0.13
COPS3-201ENST00000268717 NFS1Q9Y697 457 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms