RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 FZD8Q9H461 694 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MRPL47Q9HD33 250 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PCDH10Q9P2E7 1040 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 BARX2Q9UMQ3 279 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CNTN6Q9UQ52 1028 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TDRKHQ9Y2W6 561 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TREHO43280 583 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 NFICP08651 508 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DHRS4L1P0CG22 281 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MMP8P22894 467 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PHBP35232 272 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MBTD1Q05BQ5 628 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 RBM44Q6ZP01 1051 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FBXO36Q8NEA4 188 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 NLRP7Q8WX94 980 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ALKBH8Q96BT7 664 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CCDC97Q96F63 343 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DHRS4Q9BTZ2 278 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 XYLT2Q9H1B5 865 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF711Q9Y462 761 aa16.48■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SPECC1L-ADORA2AF8WAN1 911 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 KITP10721 976 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 OGDHQ02218 1023 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DCUN1D2Q6PH85 259 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TRIM72Q6ZMU5 477 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PRPF39Q86UA1 669 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 UBR7Q8N806 425 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ATP11CQ8NB49 1132 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CEP70Q8NHQ1 597 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ACSS3Q9H6R3 686 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PARVAQ9NVD7 372 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SHOC2Q9UQ13 582 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MEI4A8MW99 385 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ASPAP45381 313 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DLG1Q12959 904 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 HNRNPDQ14103 355 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 B3GNT6Q6ZMB0 384 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 RNF111Q6ZNA4 994 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 C2orf40Q9H1Z8 148 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF395Q9H8N7 513 aaPredicted RBP16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 USP29Q9HBJ7 922 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DNAJB4Q9UDY4 337 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TAGLN3Q9UI15 199 aa16.47■□□□□ 0.23
MAP1LC3B-201ENST00000268607 BOLA2-SMG1P6H3BVE0 249 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TNNC2P02585 160 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SMIM10L2AP0DMW4 78 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SMIM10L2BP0DMW5 78 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF24P17028 368 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 EMP3P54852 163 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ALDH18A1P54886 795 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 AQP4P55087 323 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ZNF252P-AS1Q0IIN9 211 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MSLNQ13421 630 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 KLHL38Q2WGJ6 581 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 TMCO4Q5TGY1 634 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 NCCRP1Q6ZVX7 275 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CHSY1Q86X52 802 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PALM2Q8IXS6 379 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SMYD1Q8NB12 490 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ANKRD36BP1Q96IX9 119 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SLITRK1Q96PX8 696 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MECRQ9BV79 373 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 MARCOQ9UEW3 520 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 LACTBL1A8MY62 500 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 KRT1P04264 644 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 PROZP22891 400 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CYLC2Q14093 348 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GRM2Q14416 872 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FSCN1Q16658 493 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SLC44A4Q53GD3 710 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FAM91A1Q658Y4 838 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DENND1BQ6P3S1 775 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ARID3BQ8IVW6 561 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 FAM172AQ8WUF8 416 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 DNAJB3Q8WWF6 145 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 GAB3Q8WWW8 586 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SIKE1Q9BRV8 207 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CXCL16Q9H2A7 254 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 HMGXB4Q9UGU5 601 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 SIX4Q9UIU6 781 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 WDR37Q9Y2I8 494 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
MAP1LC3B-201ENST00000268607 ITGB3P05106 788 aa16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 STAG3L1P0CL83 205 aa16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 PRKAR2AP13861 404 aaKnown RBP16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 UQCRBP14927 111 aa16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 ASPHQ12797 758 aa16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 BTG3Q14201 252 aaPredicted RBP16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 BBS9Q3SYG4 887 aa16.45■□□□□ 0.22
MAP1LC3B-201ENST00000268607 FAM47CQ5HY64 1035 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms