RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.49
SCAF11-201ENST00000266589 BASP1P80723 227 aaKnown RBP11.96□□□□□ -0.49
SCAF11-201ENST00000266589 SMARCB1Q12824 385 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 KCNT2Q6UVM3 1135 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 DENND5BQ6ZUT9 1274 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 MON1AQ86VX9 555 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 PPIL6Q8IXY8 311 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 RNF168Q8IYW5 571 aaPredicted RBP11.96□□□□□ -0.49
SCAF11-201ENST00000266589 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 CPT1BQ92523 772 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 PRCCQ92733 491 aaPredicted RBP11.96□□□□□ -0.49
SCAF11-201ENST00000266589 CASP10Q92851 521 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 RTP4Q96DX8 246 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 RBM15Q96T37 977 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCAF11-201ENST00000266589 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 CENPHQ9H3R5 247 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 RC3H2Q9HBD1 1191 aaKnown RBP11.96□□□□□ -0.49
SCAF11-201ENST00000266589 OSER1Q9NX31 292 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 GOLGA6AQ9NYA3 693 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 NUDT5Q9UKK9 219 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 GREB1Q4ZG55 1949 aa11.96□□□□□ -0.49
SCAF11-201ENST00000266589 MSI1O43347 362 aaKnown RBP11.96□□□□□ -0.5
SCAF11-201ENST00000266589 ACSL3O95573 720 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 ACRP10323 421 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 HAPLN1P10915 354 aaPredicted RBP11.96□□□□□ -0.5
SCAF11-201ENST00000266589 RPL17P18621 184 aaKnown RBP11.96□□□□□ -0.5
SCAF11-201ENST00000266589 DUSP4Q13115 394 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 EIF4EBP2Q13542 120 aaPredicted RBP11.96□□□□□ -0.5
SCAF11-201ENST00000266589 PSMD5Q16401 504 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 FAM182AQ5T1J6 154 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 ANKRD22Q5VYY1 191 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 KCTD16Q68DU8 428 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 MFSD5Q6N075 450 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 CEP128Q6ZU80 1094 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 TMEM199Q8N511 208 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 UHMK1Q8TAS1 419 aaKnown RBP11.96□□□□□ -0.5
SCAF11-201ENST00000266589 C2orf15Q8WU43 125 aaKnown RBP11.96□□□□□ -0.5
SCAF11-201ENST00000266589 OLFM3Q96PB7 478 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 QKIQ96PU8 341 aaKnown RBP eCLIP11.96□□□□□ -0.59e-8■□□□□ 9
SCAF11-201ENST00000266589 TMBIM4Q9HC24 238 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 GMIPQ9P107 970 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 PAK5Q9P286 719 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 MTRRQ9UBK8 725 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 SNX10Q9Y5X0 201 aa11.96□□□□□ -0.5
SCAF11-201ENST00000266589 PTPRSQ13332 1948 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 WDR27A2RRH5 827 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 GOLGA8MH3BSY2 632 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 C2CD2LO14523 706 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 DCLK1O15075 740 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ADAM12O43184 909 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 EFCAB14O75071 495 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 YWHAQP27348 245 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 GABPB1Q06547 395 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 BTG3Q14201 252 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 PAFAH1B3Q15102 231 aaKnown RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 KRT71Q3SY84 523 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 BRMS1LQ5PSV4 323 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 SLC8B1Q6J4K2 584 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 KIAA1841Q6NSI8 718 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 BZW1Q7L1Q6 419 aaKnown RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 HOOK3Q86VS8 718 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 RELL1Q8IUW5 271 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ARHGAP18Q8N392 663 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 NAT8LQ8N9F0 302 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 NETO2Q8NC67 525 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 TFB1MQ8WVM0 346 aaKnown RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 FBXO32Q969P5 355 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ZNF558Q96NG5 402 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 EPAS1Q99814 870 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 LRRC4CQ9HCJ2 640 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 SAYSD1Q9NPB0 183 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ARHGEF38Q9NXL2 777 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 IL37Q9NZH6 218 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 OR12D3Q9UGF7 316 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ADAM21Q9UKJ8 722 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 KIAA1671Q9BY89 1806 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 FAM92AA1XBS5 289 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 RTN3O95197 1032 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 TTC4O95801 387 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ERCC2P18074 760 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 CCR1P32246 355 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 OR1D2P34982 312 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 HCAR3P49019 387 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 GAD2Q05329 585 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 KYNUQ16719 465 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 HEATR6Q6AI08 1181 aaKnown RBP11.95□□□□□ -0.5
SCAF11-201ENST00000266589 SLC39A11Q8N1S5 342 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 SH2D3CQ8N5H7 860 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 SPATA17Q96L03 361 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 ATP6V1G3Q96LB4 118 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 C9orf72Q96LT7 481 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 SERPINB11Q96P15 392 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 NINJ2Q9NZG7 142 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 BACE2Q9Y5Z0 518 aa11.95□□□□□ -0.5
SCAF11-201ENST00000266589 KIAA0100Q14667 2235 aaKnown RBP11.94□□□□□ -0.5
SCAF11-201ENST00000266589 TCRBV7S3A2A0A539 114 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 HACD1B0YJ81 288 aa11.94□□□□□ -0.5
SCAF11-201ENST00000266589 TMEM63AO94886 807 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms