RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PIGVQ9NUD9 493 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 PIH1D1Q9NWS0 290 aaKnown RBP9.63□□□□□ -0.87
SSR3-201ENST00000265044 SMPD4Q9NXE4 827 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 MARCH2Q9P0N8 246 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 EFR3BQ9Y2G0 817 aa9.63□□□□□ -0.87
SSR3-201ENST00000265044 TTC4O95801 387 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 JCHAINP01591 159 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 SPATA31D3P0C874 917 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 SAT1P21673 171 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 HARS2P49590 506 aaKnown RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 GPR15P49685 360 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 TUBP50607 506 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 HHATQ5VTY9 493 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 LRIG3Q6UXM1 1119 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.62□□□□□ -0.873e-8■□□□□ 9.3
SSR3-201ENST00000265044 SPATA31D4Q6ZUB0 917 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 MON1AQ86VX9 555 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 ELMOD1Q8N336 334 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 ATP6V0D2Q8N8Y2 350 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 EIF1ADQ8N9N8 165 aaKnown RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 SPPL2BQ8TCT7 592 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 HTR3CQ8WXA8 447 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 CDKL2Q92772 493 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 GCNAQ96QF7 691 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 KCTD15Q96SI1 283 aaPredicted RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 MAGEB5Q9BZ81 275 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 PRDM12Q9H4Q4 367 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 TMLHEQ9NVH6 421 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 TRPM5Q9NZQ8 1165 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 ZC3H7BQ9UGR2 993 aaKnown RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 SNX10Q9Y5X0 201 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 RIPK2O43353 540 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 RTN3O95197 1032 aaPredicted RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 RFX8Q6ZV50 586 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 C12orf50Q8NA57 414 aaPredicted RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 GLIS1Q8NBF1 620 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 ART4Q93070 314 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 FSD1LQ9BXM9 530 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 MTIF3Q9H2K0 278 aaKnown RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 UBP1Q9NZI7 540 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 GMIPQ9P107 970 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 NR2E3Q9Y5X4 410 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 CENPFP49454 3210 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 A6NNZ2 444 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 HGSO14964 777 aaPredicted RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 GALTP07902 379 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 COL6A1P12109 1028 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 NR2C2P49116 596 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 GDF10P55107 478 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 GUCY1A3Q02108 690 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 SEPT6Q14141 434 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 NOMO1Q15155 1222 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 TUBB8Q3ZCM7 444 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 PLEKHG4Q58EX7 1191 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 ITPRIPL1Q6GPH6 555 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 TADA2BQ86TJ2 420 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 TAC4Q86UU9 113 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 BBS5Q8N3I7 341 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 ARFGAP1Q8N6T3 406 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 COLGALT1Q8NBJ5 622 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 FBXO36Q8NEA4 188 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 KCTD13Q8WZ19 329 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 DPF3Q92784 378 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 NKD2Q969F2 451 aaPredicted RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 APOL2Q9BQE5 337 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 BFARQ9NZS9 450 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 NME7Q9Y5B8 376 aa9.62□□□□□ -0.87
SSR3-201ENST00000265044 MYO18AQ92614 2054 aaKnown RBP9.62□□□□□ -0.87
SSR3-201ENST00000265044 H0YHG0 523 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 EBAG9O00559 213 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 BNIP3LO60238 219 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 SLC4A1P02730 911 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 SHBGP04278 402 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 CA4P22748 312 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 CACNA2D1P54289 1103 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 PDE1BQ01064 536 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 ZNF844Q08AG5 666 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 STAT4Q14765 748 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 FAM26DQ5JW98 314 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 KIAA0319Q5VV43 1072 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 FBXO46Q6PJ61 603 aaPredicted RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 TSNARE1Q96NA8 513 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 ENTPD7Q9NQZ7 604 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 MRPL17Q9NRX2 175 aaKnown RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 SHOC2Q9UQ13 582 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 RNF103O00237 685 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 TLR5O60602 858 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 CDH16O75309 829 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 BANF1O75531 89 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 PIAS1O75925 651 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
SSR3-201ENST00000265044 LRG1P02750 347 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 BRAFP15056 766 aa9.61□□□□□ -0.87
SSR3-201ENST00000265044 SSTR1P30872 391 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms