RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 KPNA7A9QM74 516 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 USP12O75317 370 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 ESRRBO95718 433 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 CSH1P0DML2 217 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 CSH2P0DML3 217 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 YAP1P46937 504 aaKnown RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 ZNF618Q5T7W0 954 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 ZC3H3Q8IXZ2 948 aaKnown RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 METTL25Q8N6Q8 603 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 LRTOMTQ8WZ04 291 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 PAK5Q9P286 719 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 CCNL1Q9UK58 526 aaPredicted RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 BCL10O95999 233 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 MT-ND1P03886 318 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 ITGAVP06756 1048 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 UGT1A6P19224 532 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 UGT1A1P22309 533 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 UGT1A4P22310 534 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 UGT1A3P35503 534 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 UGT1A5P35504 534 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 PPARGP37231 505 aaPredicted RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 HSPA13P48723 471 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 FOXD4Q12950 439 aaPredicted RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 UGT2A3Q6UWM9 527 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 DSELQ8IZU8 1212 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 RYBPQ8N488 228 aaPredicted RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 DQX1Q8TE96 717 aaKnown RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 ILKAPQ9H0C8 392 aaPredicted RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
GPC1-201ENST00000264039 CYP26B1Q9NR63 512 aa16.73■□□□□ 0.27
GPC1-201ENST00000264039 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 SPAG6O75602 509 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 KLF1Q13351 362 aaPredicted RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 DAW1Q8N136 415 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 NRBF2Q96F24 287 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 DGCR6LQ9BY27 220 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 C20orf27Q9GZN8 174 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 SPC25Q9HBM1 224 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 FAM49BQ9NUQ9 324 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 DDX43Q9NXZ2 648 aaKnown RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 CDC14AQ9UNH5 594 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 TELO2Q9Y4R8 837 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 GLRA3O75311 464 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 ERVK-10P10266 1014 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 HOXD12P35452 270 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 DGKDQ16760 1214 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 ZNF699Q32M78 642 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 TRAPPC3LQ5T215 181 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 JOSD2Q8TAC2 188 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 HDAC11Q96DB2 347 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 FAM96AQ9H5X1 160 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 EBF1Q9UH73 591 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 AP4E1Q9UPM8 1137 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 DRG1Q9Y295 367 aaKnown RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 WDR37Q9Y2I8 494 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 TOR1BO14657 336 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 KCNH1O95259 989 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 HSPA8P11142 646 aaKnown RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 IDH3AP50213 366 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 ZIK1Q3SY52 487 aaPredicted RBP16.72■□□□□ 0.27
GPC1-201ENST00000264039 PITRM1Q5JRX3 1037 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 GLRA4Q5JXX5 417 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 KDELC2Q7Z4H8 507 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 ZNF410Q86VK4 478 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 BPIFB6Q8NFQ5 453 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 MAF1Q9H063 256 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 CYP4F12Q9HCS2 524 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 PTPRHQ9HD43 1115 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 HSFX1Q9UBD0 423 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 CROCCQ5TZA2 2017 aa16.72■□□□□ 0.27
GPC1-201ENST00000264039 TMEM247A6NEH6 219 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 BUD23O43709 281 aaKnown RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 CDH2P19022 906 aaPredicted RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 RAP1GAPP47736 663 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 GALNT18Q6P9A2 607 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 BRINP3Q76B58 766 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 ZC3H15Q8WU90 426 aaKnown RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 LENG9Q96B70 501 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 POLR3FQ9H1D9 316 aaPredicted RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 K7EPI3 171 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 MATN2O00339 956 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 CLOCKO15516 846 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 UNGP13051 313 aaPredicted RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 CDKN2BP42772 138 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 NT5C2P49902 561 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 GPC3P51654 580 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 NAGLUP54802 743 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 SEL1L3Q68CR1 1132 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 TATDN1Q6P1N9 297 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 ZNF781Q8N8C0 355 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 ZNF669Q96BR6 464 aaPredicted RBP16.71■□□□□ 0.27
GPC1-201ENST00000264039 CXorf21Q9HAI6 301 aa16.71■□□□□ 0.27
GPC1-201ENST00000264039 PSMD10O75832 226 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms