RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PMPCBO75439 489 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 OCRLQ01968 901 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 TMEM63BQ5T3F8 832 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 PDPK2PQ6A1A2 396 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SLC44A1Q8WWI5 657 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 CYTH4Q9UIA0 394 aa16.67■□□□□ 0.26
PDZRN3-201ENST00000263666 SDR42E2A6NKP2 422 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PEX1O43933 1283 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 IL18RAPO95256 599 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 RANBP1P43487 201 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ZNF143P52747 638 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PLK1P53350 603 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 IRX1P78414 480 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ADIGQ0VDE8 80 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 MAP7Q14244 749 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PARP6Q2NL67 630 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PMF1Q6P1K2 205 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 CATSPERGQ6ZRH7 1159 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 IFNEQ86WN2 208 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 OR52K1Q8NGK4 314 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 TMPRSS4Q9NRS4 437 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 NUDT5Q9UKK9 219 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PAPSS1O43252 624 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 POLBP06746 335 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ARL2P36404 184 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ARPP19P56211 112 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PRPSAP1Q14558 356 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 GALNTL6Q49A17 601 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 SLC4A11Q8NBS3 891 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 CATSPER2Q96P56 530 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PHACTR1Q9C0D0 580 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 V9GYQ6 96 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 MAFO75444 373 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 METTL18O95568 372 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 FGFR1P11362 822 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 NCAM1P13591 858 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 GM2AP17900 193 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PAPOLAP51003 745 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 KRT80Q6KB66 452 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ULK2Q8IYT8 1036 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 DEFB106AQ8N104 65 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 NAT8LQ8N9F0 302 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 SLC7A6OSQ96CW6 309 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 NUF2Q9BZD4 464 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 CITO14578 2027 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 ANKRD12Q6UB98 2062 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 CNTNAP2Q9UHC6 1331 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 JCHAINP01591 159 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 CPA3P15088 417 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 NELFEP18615 380 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 FSCBQ5H9T9 825 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 EFHC1Q5JVL4 640 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 DCAKDQ8WVC6 231 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 PCDH18Q9HCL0 1135 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 DDIT4Q9NX09 232 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 MFHAS1Q9Y4C4 1052 aa16.66■□□□□ 0.26
PDZRN3-201ENST00000263666 LAMB1P07942 1786 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 CLDN5O00501 218 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SKIV2L2P42285 1042 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 NEK3P51956 506 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 TBL3Q12788 808 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 MAP3K21Q5TCX8 1036 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 C10orf107Q8IVU9 208 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 HASPINQ8TF76 798 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SH3GL3Q99963 347 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SOX13Q9UN79 622 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 PRRC2BQ5JSZ5 2229 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 XPO1O14980 1071 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ZNF280AP59817 542 aaPredicted RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 PTP4A2Q12974 167 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 TMED1Q13445 227 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 BLMHQ13867 455 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ARHGEF6Q15052 776 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ANO7Q6IWH7 933 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SCN4BQ8IWT1 228 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 REPS2Q8NFH8 660 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 FBXO27Q8NI29 283 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 HTR3CQ8WXA8 447 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 MIPEPQ99797 713 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 WDR55Q9H6Y2 383 aaPredicted RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 NRDE2Q9H7Z3 1164 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 PTPRHQ9HD43 1115 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 BTAF1O14981 1849 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 FZD9O00144 591 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 PLA2G6O60733 806 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 PFDN1O60925 122 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 RAG1P15918 1043 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ACADSP16219 412 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SERPINB9P50453 376 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ACVR2BQ13705 512 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ACAD11Q709F0 780 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 TRIML2Q8N7C3 387 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms