RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 LGSNQ5TDP6 509 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 HEATR6Q6AI08 1181 aaKnown RBP9.42□□□□□ -0.9
MSH4-201ENST00000263187 LBX2Q6XYB7 198 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 RNF148Q8N7C7 305 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 SIGLEC10Q96LC7 697 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 PDZD7Q9H5P4 517 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 PPCSQ9HAB8 311 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 GOLGA2P5Q9HBQ8 144 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 UBP1Q9NZI7 540 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 TUBGCP4Q9UGJ1 667 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 SCOCQ9UIL1 159 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 BARX2Q9UMQ3 279 aaPredicted RBP9.42□□□□□ -0.9
MSH4-201ENST00000263187 EFR3BQ9Y2G0 817 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ADM5C9JUS6 153 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 BPGMP07738 259 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 PROZP22891 400 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 LMO2P25791 158 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ARRB2P32121 409 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 CCR10P46092 362 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 OCRLQ01968 901 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 GRIK3Q13003 919 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ITGA9Q13797 1035 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 SURF1Q15526 300 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 FAM47CQ5HY64 1035 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 CELF3Q5SZQ8 465 aaKnown RBP9.42□□□□□ -0.9
MSH4-201ENST00000263187 FOXB2Q5VYV0 432 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 FAM219BQ5XKK7 198 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 DPY19L2Q6NUT2 758 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 CHST13Q8NET6 341 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 ZNF398Q8TD17 642 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 EBNA1BP2Q99848 306 aaKnown RBP9.42□□□□□ -0.9
MSH4-201ENST00000263187 WWP1Q9H0M0 922 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 SNTG2Q9NY99 539 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 TAGLN3Q9UI15 199 aa9.42□□□□□ -0.9
MSH4-201ENST00000263187 LTBP3Q9NS15 1303 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 CAPN14A8MX76 684 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 A8MXQ7 604 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 LMNAP02545 664 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 ALDOAP04075 364 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 VAV1P15498 845 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 SERPINB6P35237 376 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 MRPS35P82673 323 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 TEX44Q53QW1 395 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 TMPRSS6Q8IU80 811 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 GSDMBQ8TAX9 411 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
MSH4-201ENST00000263187 ZMAT2Q96NC0 199 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 C2orf40Q9H1Z8 148 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 SPATS2LQ9NUQ6 558 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 AK5Q9Y6K8 562 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 LAMA2P24043 3122 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
MSH4-201ENST00000263187 TPH1P17752 444 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 SLC1A6P48664 564 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 OLFML1Q6UWY5 402 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 HPS6Q86YV9 775 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 PHTF2Q8N3S3 785 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 FAM136AQ96C01 138 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 TUBGCP5Q96RT8 1024 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 KCTD15Q96SI1 283 aaPredicted RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 ZNF184Q99676 751 aaPredicted RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 XPNPEP3Q9NQH7 507 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 NDE1Q9NXR1 346 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 KCNK4Q9NYG8 393 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 STX18Q9P2W9 335 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 LRCH1Q9Y2L9 728 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 MGAMO43451 1857 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 E7ENQ6 273 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 DCXO43602 365 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 DNAJC6O75061 913 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 IGFBP6P24592 240 aaPredicted RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 ACAT1P24752 427 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 PSMB4P28070 264 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 IL31Q6EBC2 164 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 SPATA6LQ8N4H0 392 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 COLGALT1Q8NBJ5 622 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 MARK4Q96L34 752 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 TBCBQ99426 244 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 AGAP2Q99490 1192 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 EBF3Q9H4W6 596 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 GBA2Q9HCG7 927 aaPredicted RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 PAPOLBQ9NRJ5 636 aaKnown RBP9.41□□□□□ -0.9
MSH4-201ENST00000263187 DTLQ9NZJ0 730 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 TMEM216Q9P0N5 145 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 HESX1Q9UBX0 185 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 ZNF112Q9UJU3 913 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 TNFSF13BQ9Y275 285 aa9.41□□□□□ -0.9
MSH4-201ENST00000263187 CLDN5O00501 218 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 NDC80O14777 642 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 ATP9BO43861 1147 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 TGDSO95455 350 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 P4HA1P13674 534 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 TYK2P29597 1187 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 L1CAMP32004 1257 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 SLC6A3Q01959 620 aa9.4□□□□□ -0.9
MSH4-201ENST00000263187 CUL3Q13618 768 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms