RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 IRAK3Q9Y616 596 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 I6L893 689 aaPredicted RBP13.47□□□□□ -0.25
VAMP7-201ENST00000262640 MSI1O43347 362 aaKnown RBP13.47□□□□□ -0.25
VAMP7-201ENST00000262640 ADH1AP07327 375 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 HMGA1P17096 107 aaKnown RBP13.47□□□□□ -0.25
VAMP7-201ENST00000262640 UBE3AQ05086 875 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 TAF12Q16514 161 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 SNX30Q5VWJ9 437 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 NPNTQ6UXI9 565 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 RFX8Q6ZV50 586 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 CCDC89Q8N998 374 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 SNX24Q9Y343 169 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 NR2E3Q9Y5X4 410 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 KRT14P02533 472 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 RBP3P10745 1247 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 AMPD1P23109 780 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 ECHS1P30084 290 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 RPL21P46778 160 aaKnown RBP13.47□□□□□ -0.25
VAMP7-201ENST00000262640 EPHB3P54753 998 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 TPI1P60174 286 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 TWF1Q12792 350 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 EFEMP1Q12805 493 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 DPYSQ14117 519 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 C10orf120Q5SQS8 335 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 CAVIN3Q969G5 261 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 SLC39A13Q96H72 371 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 TCF25Q9BQ70 676 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 OR12D3Q9UGF7 316 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 HEY1Q9Y5J3 304 aa13.47□□□□□ -0.25
VAMP7-201ENST00000262640 C5orf67F2Z3F1 127 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 FAM72CH0Y354 149 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 ATP8B1O43520 1251 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 KLRC2P26717 231 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 HTR7P34969 479 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 TBX4P57082 545 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 TRIP4Q15650 581 aaPredicted RBP13.46□□□□□ -0.25
VAMP7-201ENST00000262640 FAM72AQ5TYM5 149 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 NCBP2-AS2Q69YL0 99 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 FAM72DQ6L9T8 149 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 BZW1Q7L1Q6 419 aaKnown RBP13.46□□□□□ -0.25
VAMP7-201ENST00000262640 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.25
VAMP7-201ENST00000262640 FAM72BQ86X60 149 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 SNF8Q96H20 258 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 ABHD8Q96I13 439 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 ZNF512Q96ME7 567 aaPredicted RBP13.46□□□□□ -0.25
VAMP7-201ENST00000262640 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 TMEM121Q9BTD3 319 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 ALG13Q9NP73 1137 aaKnown RBP13.46□□□□□ -0.25
VAMP7-201ENST00000262640 GRHL1Q9NZI5 618 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 MARCH2Q9P0N8 246 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 WHRNQ9P202 907 aa13.46□□□□□ -0.25
VAMP7-201ENST00000262640 UXTQ9UBK9 157 aaPredicted RBP13.46□□□□□ -0.25
VAMP7-201ENST00000262640 GREB1Q4ZG55 1949 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 KCNU1A8MYU2 1149 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 SGK1O00141 431 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 TGM5O43548 720 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 TLR5O60602 858 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 RB1P06400 928 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 TNNT3P45378 269 aaPredicted RBP13.46□□□□□ -0.26
VAMP7-201ENST00000262640 PPP3CCP48454 512 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 KPNA1P52294 538 aaPredicted RBP13.46□□□□□ -0.26
VAMP7-201ENST00000262640 XRCC4Q13426 336 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.26
VAMP7-201ENST00000262640 C9orf50Q5SZB4 431 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 HDXQ7Z353 690 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 ITIH5Q86UX2 942 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 SPPL3Q8TCT6 385 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 RSAD2Q8WXG1 361 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 FCRL2Q96LA5 508 aaPredicted RBP13.46□□□□□ -0.26
VAMP7-201ENST00000262640 PCDH9Q9HC56 1237 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.26
VAMP7-201ENST00000262640 CFAP69A5D8W1 941 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 H7C0C1 242 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 PAGE1O75459 146 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 APOEP02649 317 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ADCY8P40145 1251 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 MAGEA10P43363 369 aaPredicted RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ATP5OP48047 213 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ERVFC1P60507 584 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 CALCOCO2Q13137 446 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 DARS2Q6PI48 645 aaKnown RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 LILRA6Q6PI73 481 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 CCDC149Q6ZUS6 474 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ZC3H18Q86VM9 953 aaKnown RBP13.45□□□□□ -0.26
VAMP7-201ENST00000262640 BBOF1Q8ND07 529 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 PSMG2Q969U7 264 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 C17orf80Q9BSJ5 609 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 TLR9Q9NR96 1032 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ZDHHC18Q9NUE0 388 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ASB3Q9Y575 518 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 DCLK1O15075 740 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 LPXNO60711 386 aa13.45□□□□□ -0.26
VAMP7-201ENST00000262640 TBX18O95935 607 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms