RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ST8SIA6P61647 398 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 STILQ15468 1287 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 CREBRFQ8IUR6 639 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 SLC41A1Q8IVJ1 513 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 UNC45BQ8IWX7 931 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 FMR1NBQ8N0W7 255 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-202ENST00000262396 SETD7Q8WTS6 366 aaKnown RBP12.78□□□□□ -0.36
TRAF4-202ENST00000262396 SORCS1Q8WY21 1168 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 ERCC4Q92889 916 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-202ENST00000262396 ZNF419Q96HQ0 510 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-202ENST00000262396 DDX50Q9BQ39 737 aaKnown RBP12.78□□□□□ -0.36
TRAF4-202ENST00000262396 SCNM1Q9BWG6 230 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 ST7Q9NRC1 585 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 FBXO10Q9UK96 956 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 HCN2Q9UL51 889 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 KIAA1549LQ6ZVL6 1849 aa12.78□□□□□ -0.36
TRAF4-202ENST00000262396 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 C1QTNF9BB2RNN3 333 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 TULP2O00295 520 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 CAPN9O14815 690 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 DNTTP04053 509 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 PAEPP09466 180 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 KRT5P13647 590 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 POLR2EP19388 210 aaKnown RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 FMO5P49326 533 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 TRIP4Q15650 581 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 DCAF12L1Q5VU92 463 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 PM20D1Q6GTS8 502 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 AHI1Q8N157 1196 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 ZCCHC9Q8N567 271 aaKnown RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 ZNF557Q8N988 423 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 OR2I1PQ8NGU4 316 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 DHTKD1Q96HY7 919 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 MIS12Q9H081 205 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 CAPN10Q9HC96 672 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 CD93Q9NPY3 652 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 ITM2CQ9NQX7 267 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 ABCB8Q9NUT2 735 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 WSB2Q9NYS7 404 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-202ENST00000262396 STIM2Q9P246 746 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 NCKAP1Q9Y2A7 1128 aa12.77□□□□□ -0.37
TRAF4-202ENST00000262396 NUP205Q92621 2012 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 TMEM8BA6NDV4 472 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 YJEFN3A6XGL0 299 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 E7ENQ6 273 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 MSI1O43347 362 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 TBL1XO60907 577 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 RNASEH1O60930 286 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 FBXO21O94952 628 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 CER1O95813 267 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 HLA-EP13747 358 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 TPMTP51580 245 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 TBX4P57082 545 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 SFSWAPQ12872 951 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 SEMA3BQ13214 749 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 SLC14A1Q13336 389 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 TEAD4Q15561 434 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 TTC31Q49AM3 519 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 PEAR1Q5VY43 1037 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 NUGGCQ68CJ6 796 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 ADAT2Q7Z6V5 191 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 OR2T3Q8NH03 318 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 CYB5D2Q8WUJ1 264 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 KCTD13Q8WZ19 329 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 PIWIL1Q96J94 861 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 MKRN2Q9H000 416 aaKnown RBP12.76□□□□□ -0.37
TRAF4-202ENST00000262396 LHX5Q9H2C1 402 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 SUN2Q9UH99 717 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 GGA2Q9UJY4 613 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 COQ4Q9Y3A0 265 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
TRAF4-202ENST00000262396 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 O00370 1275 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 SH3BP5O60239 455 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 MOCS3O95396 460 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 LATS1O95835 1130 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 TOP3BO95985 862 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 LTFP02788 710 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 PABPC1P11940 636 aaKnown RBP12.75□□□□□ -0.37
TRAF4-202ENST00000262396 PRKCHP24723 683 aa12.75□□□□□ -0.37
TRAF4-202ENST00000262396 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms