RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 NKX3-2P78367 333 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 STAT4Q14765 748 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 ARMC3Q5W041 872 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 LHX8Q68G74 356 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 STRADAQ7RTN6 431 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 PCGF5Q86SE9 256 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 METTL23Q86XA0 190 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 DYDC1Q8WWB3 177 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 KCTD13Q8WZ19 329 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 KLF6Q99612 283 aaPredicted RBP14.04□□□□□ -0.16
VMP1-201ENST00000262291 PCSK1P29120 753 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 STIP1P31948 543 aaKnown RBP14.04□□□□□ -0.16
VMP1-201ENST00000262291 PBX3P40426 434 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 SCTRP47872 440 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 RAB27AP51159 221 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 YWHAGP61981 247 aaKnown RBP eCLIP14.04□□□□□ -0.16
VMP1-201ENST00000262291 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
VMP1-201ENST00000262291 AP1B1Q10567 949 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 TRAF7Q6Q0C0 670 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 ZNF598Q86UK7 904 aaKnown RBP14.04□□□□□ -0.16
VMP1-201ENST00000262291 PDIK1LQ8N165 341 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 CCNYQ8ND76 341 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 PGBD4Q96DM1 585 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 RSRC1Q96IZ7 334 aaKnown RBP14.04□□□□□ -0.16
VMP1-201ENST00000262291 PGLYRP2Q96PD5 576 aa14.04□□□□□ -0.16
VMP1-201ENST00000262291 CNOT10Q9H9A5 744 aaKnown RBP14.04□□□□□ -0.16
VMP1-201ENST00000262291 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.04□□□□□ -0.167e-24■□□□□ 10.4
VMP1-201ENST00000262291 GOLGA8RI6L899 631 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 CDH16O75309 829 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 LTFP02788 710 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 VIMP08670 466 aaKnown RBP14.03□□□□□ -0.16
VMP1-201ENST00000262291 KRT15P19012 456 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 KCNJ11Q14654 390 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 INTS6LQ5JSJ4 861 aaKnown RBP14.03□□□□□ -0.16
VMP1-201ENST00000262291 TAOK1Q7L7X3 1001 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 CPLX4Q7Z7G2 160 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 SCN4BQ8IWT1 228 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 LRRC34Q8IZ02 419 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 GPR152Q8TDT2 470 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 SLC2A13Q96QE2 648 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 STMN4Q9H169 189 aaPredicted RBP14.03□□□□□ -0.16
VMP1-201ENST00000262291 C12orf65Q9H3J6 166 aaKnown RBP14.03□□□□□ -0.16
VMP1-201ENST00000262291 CYLDQ9NQC7 956 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 STAP1Q9ULZ2 295 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 USP3Q9Y6I4 520 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 KBTBD13C9JR72 458 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 GPR15P49685 360 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 OLIG2Q13516 323 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 BHLHA9Q7RTU4 235 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 FOXP3Q9BZS1 431 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 RABGEF1Q9UJ41 708 aa14.03□□□□□ -0.16
VMP1-201ENST00000262291 EEF2KO00418 725 aaKnown RBP14.02□□□□□ -0.16
VMP1-201ENST00000262291 HOXD10P28358 340 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 ARPP19P56211 112 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 SLC39A12Q504Y0 691 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 SLC45A4Q5BKX6 768 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 GLB1LQ6UWU2 654 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 MPP5Q8N3R9 675 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.16
VMP1-201ENST00000262291 MICAL1Q8TDZ2 1067 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 MAML1Q92585 1016 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 RNF34Q969K3 372 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 NOD2Q9HC29 1040 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 WDR6Q9NNW5 1121 aaKnown RBP14.02□□□□□ -0.16
VMP1-201ENST00000262291 ABI2Q9NYB9 513 aaPredicted RBP14.02□□□□□ -0.16
VMP1-201ENST00000262291 PAK5Q9P286 719 aa14.02□□□□□ -0.16
VMP1-201ENST00000262291 C9IYK1 514 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 KCNK1O00180 336 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 FAM155BO75949 473 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 DRD4P21917 467 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 SCNN1AP37088 669 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 GRIK1P39086 918 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 CRADDP78560 199 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 EFHC2Q5JST6 749 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 THEMIS2Q5TEJ8 643 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 CROCCP2Q86T23 111 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.17
VMP1-201ENST00000262291 TTC25Q96NG3 672 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 NUP205Q92621 2012 aa14.02□□□□□ -0.17
VMP1-201ENST00000262291 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 A6NNZ2 444 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 MSI1O43347 362 aaKnown RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 SOAT2O75908 522 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 TOMM70O94826 608 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 SLC8A1P32418 973 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ADRA1BP35368 520 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 TUBB8Q3ZCM7 444 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 HEATR6Q6AI08 1181 aaKnown RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 TAC4Q86UU9 113 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 CDKL3Q8IVW4 592 aaPredicted RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 ATP11CQ8NB49 1132 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 NT5C3BQ969T7 300 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 YIPF3Q9GZM5 350 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 SIK2Q9H0K1 926 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ACTR5Q9H9F9 607 aaPredicted RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 HMX1Q9NP08 348 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms