RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CHSY1Q86X52 802 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 OFCC1Q8IZS5 231 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF781Q8N8C0 355 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 TMEM161BQ8NDZ6 487 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 PDCD6IPQ8WUM4 868 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 CCDC106Q9BWC9 280 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 ADNPQ9H2P0 1102 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 TASP1Q9H6P5 420 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 C9JVG2 144 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 SERPINB2P05120 415 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 EIF4BP23588 611 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 CDKL1Q00532 357 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 GNA12Q03113 381 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 GABPAQ06546 454 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 BNIP3Q12983 259 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 DENND1BQ6P3S1 775 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 TFB1MQ8WVM0 346 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 CASP10Q92851 521 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 FAM149B1Q96BN6 582 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 WDR41Q9HAD4 459 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 MYRFQ9Y2G1 1151 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 PCDHGA4Q9Y5G9 962 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 NUP188Q5SRE5 1749 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 PTPN1P18031 435 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 NUMBP49757 651 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 YWHAZP63104 245 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 IL1RL1Q01638 556 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 DLG2Q15700 870 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC9B1Q4ZJI4 515 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 NUP93Q8N1F7 819 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 LRTOMTQ8WZ04 291 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 C7orf26Q96N11 449 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 OR52B2Q96RD2 323 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 COQ10BQ9H8M1 238 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC39A10Q9ULF5 831 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF510Q9Y2H8 683 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 ATRNL1Q5VV63 1379 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF839A8K0R7 811 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 GMNNO75496 209 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 TIPRLO75663 272 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 S100BP04271 92 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 ETV4P43268 484 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 MRPS5P82675 430 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 RAB6CQ53S08 254 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 TMEM130Q8N3G9 435 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 TAAR1Q96RJ0 339 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 BRD8Q9H0E9 1235 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 RAB6CQ9H0N0 254 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 CYP4F12Q9HCS2 524 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 CCDC167Q9P0B6 97 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 DRG1Q9Y295 367 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 TMX2-CTNND1H3BSU7 103 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 LRCH4O75427 683 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 CST3P01034 146 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 SERPINE1P05121 402 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 CD1EP15812 388 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 MYBPC1Q00872 1141 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 DGKZQ13574 1117 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 TBCCQ15814 346 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 GCOM2Q9BZD3 368 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 DDX43Q9NXZ2 648 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 TLK1Q9UKI8 766 aa16.36■□□□□ 0.21
PRPF40B-201ENST00000261897 CAPN14A8MX76 684 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 MAGP20916 626 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 MPSTP25325 297 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 WNT7BP56706 349 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 TFDP2Q14188 446 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 EGFLAMQ63HQ2 1017 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 DSELQ8IZU8 1212 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 WDR83Q9BRX9 315 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 STK32BQ9NY57 414 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 TMEM216Q9P0N5 145 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 EBF1Q9UH73 591 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 CDC14AQ9UNH5 594 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 A0A1W2PPW3 197 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 INO80B-WBP1J3KQ70 363 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 CCDC130P13994 396 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 HEATR6Q6AI08 1181 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 RAVER1Q8IY67 606 aaKnown RBP16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 CNDP1Q96KN2 507 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 MTG1Q9BT17 334 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 POLIQ9UNA4 740 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 COQ6Q9Y2Z9 468 aa16.35■□□□□ 0.21
PRPF40B-201ENST00000261897 PSMD12O00232 456 aaPredicted RBP16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ADRA2BP18089 450 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 ME2P23368 584 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 WASHC5Q12768 1159 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 PLCL1Q15111 1095 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 DGKDQ16760 1214 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 POTEHQ6S545 545 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 C16orf89Q6UX73 402 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 TMCO5AQ8N6Q1 288 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 POLR1BQ9H9Y6 1135 aa16.34■□□□□ 0.21
PRPF40B-201ENST00000261897 KCND2Q9NZV8 630 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms