RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GNG11P61952 73 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 HADHQ16836 314 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 NUGGCQ68CJ6 796 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 ST13P5Q8NFI4 369 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 KRT35Q92764 455 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 NTAN1Q96AB6 310 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 WDR24Q96S15 920 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 SNRNP25Q9BV90 132 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 MAGEB5Q9BZ81 275 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 CFAP97Q9P2B7 532 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 FZD10Q9ULW2 581 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 SCAMP3O14828 347 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 APOEP02649 317 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 RARAP10276 462 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 LAMP2P13473 410 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 FCARP24071 287 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 CORO1AP31146 461 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 CTNNA1P35221 906 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 VIPR2P41587 438 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 TFF2Q03403 129 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 MEI1Q5TIA1 1274 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 RHOT1Q8IXI2 618 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 ACSF2Q96CM8 615 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 RSPRY1Q96DX4 576 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 HES6Q96HZ4 224 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 C16orf45Q96MC5 204 aaPredicted RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 TMEM51Q9NW97 253 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 GPATCH2LQ9NWQ4 482 aa16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 HELZP42694 1942 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-201ENST00000260054 NUP210Q8TEM1 1887 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 ENC1O14682 589 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 FANCGO15287 622 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 PAGE1O75459 146 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 TCF3P15923 654 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 CTNNA2P26232 953 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 HARS2P49590 506 aaKnown RBP16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 SCAPQ12770 1279 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 USP4Q13107 963 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 ZNF77Q15935 545 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 CA9Q16790 459 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 ARL13BQ3SXY8 428 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 BOLA3Q53S33 107 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 ERMARDQ5T6L9 678 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 LRRC38Q5VT99 294 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 Q6ZNB5 142 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 DENND1CQ8IV53 801 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 CELF5Q8N6W0 485 aaKnown RBP16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 HSPH1Q92598 858 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 LRRC3BQ96PB8 259 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 TLR10Q9BXR5 811 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 TRPV4Q9HBA0 871 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 AGO1Q9UL18 857 aaKnown RBP16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
CCDC90B-201ENST00000260054 DDX3YO15523 660 aaKnown RBP16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 PSTPIP1O43586 416 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 KRT7P08729 469 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 GGCXP38435 758 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 SMAD2Q15796 467 aaKnown RBP16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 PIK3R6Q5UE93 754 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 NADSYN1Q6IA69 706 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 PYROXD2Q8N2H3 581 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 ATP6V0D2Q8N8Y2 350 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 TEKT4Q8WW24 435 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 ALG3Q92685 438 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 BTN2A3PQ96KV6 586 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 KIF9Q9HAQ2 790 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 SH3BP1Q9Y3L3 701 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 JRKLQ9Y4A0 524 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 PCDHA3Q9Y5H8 950 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 SNX10Q9Y5X0 201 aa16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
CCDC90B-201ENST00000260054 CCDC66A2RUB6 948 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 MIF4GDA9UHW6 222 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 ESPNB1AK53 854 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 PEX5P50542 639 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 DNA2P51530 1060 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 AIF1P55008 147 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 ETF1P62495 437 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 EFHC2Q5JST6 749 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 TANGO2Q6ICL3 276 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 PTCRAQ6ISU1 281 aaPredicted RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 HTR3DQ70Z44 454 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 HAPLN3Q96S86 360 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 DCLK3Q9C098 648 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 SIK2Q9H0K1 926 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 EPS15L1Q9UBC2 864 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 SLC12A6Q9UHW9 1150 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 LSM7Q9UK45 103 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 HS3ST4Q9Y661 456 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 GOLGA6L7A0A1B0GV03 622 aa16.37■□□□□ 0.21
CCDC90B-201ENST00000260054 E2F8A0AVK6 867 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms