RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CAPS2Q9BXY5 557 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 CLDND1Q9NY35 253 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 CCDC189A1A4V9 331 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 M0R3G1 203 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC9A1P19634 815 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 AKT2P31751 481 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SERPINB4P48594 390 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SMAD3P84022 425 aaKnown RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 PDCLQ13371 301 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 PARP15Q460N3 678 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SETD3Q86TU7 594 aaPredicted RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 DENND1AQ8TEH3 1009 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 ROPN1BQ9BZX4 212 aaPredicted RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 ROPN1Q9HAT0 212 aaPredicted RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 TREHO43280 583 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 CYTH3O43739 400 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 ATP6V1E1P36543 226 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 MMP13P45452 471 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 CLK3P49761 638 aaKnown RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 PCSK7Q16549 785 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC25A41Q8N5S1 370 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 C12orf50Q8NA57 414 aaPredicted RBP13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 CEP70Q8NHQ1 597 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC30A5Q8TAD4 765 aa13.79□□□□□ -0.2
PRPF38A-201ENST00000257181 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 TSPAN1O60635 241 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ITGB5P18084 799 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 DAB2P98082 770 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SNX27Q96L92 541 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 AP1M1Q9BXS5 423 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ULBP1Q9BZM6 244 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 NHSQ6T4R5 1651 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 APRTP07741 180 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CASP1P29466 404 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CDK16Q00536 496 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 PURAQ00577 322 aaKnown RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 MAD2L1Q13257 205 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 C17orf99Q6UX52 265 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SH3BP5LQ7L8J4 393 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 HES6Q96HZ4 224 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ABCG4Q9H172 646 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CCDC78A2IDD5 438 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 F8VZ95 297 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 HNRNPCL1O60812 293 aaKnown RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CCDC22O60826 627 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SERPIND1P05546 499 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 DUSP3P51452 185 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 VCPP55072 806 aaKnown RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 MDM2Q00987 491 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 HLA-DQA1Q5Y7H0 255 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC39A5Q6ZMH5 540 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SLC22A9Q8IVM8 553 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CCDC197Q8NCU1 140 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 CXorf40BQ96DE9 158 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 MFSD14AQ96MC6 490 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 PGLYRP2Q96PD5 576 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 TBL1XO60907 577 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ARF4P18085 180 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SESN2P58004 480 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 YBEYP58557 167 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ZNF200P98182 395 aaPredicted RBP13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 EFTUD2Q15029 972 aaKnown RBP eCLIP13.78□□□□□ -0.22e-8■■■■■ 57.6
PRPF38A-201ENST00000257181 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ASB2Q96Q27 587 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 ZSWIM1Q9BR11 485 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 NEUROG2Q9H2A3 272 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 LHX5Q9H2C1 402 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
PRPF38A-201ENST00000257181 SUPT3HB4E1H0 165 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 F2P00734 622 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 MAPKAPK2P49137 400 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 TRIM60Q495X7 471 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 ZNF784Q8NCA9 323 aaPredicted RBP13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 TSTD1Q8NFU3 115 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 RSRC1Q96IZ7 334 aaKnown RBP13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 EIF3LQ9Y262 564 aaKnown RBP13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 ADGRG1Q9Y653 693 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 EML1O00423 815 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 AMD1P17707 334 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 TTI2Q6NXR4 508 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 FAM47EQ6ZV65 393 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 BLOC1S5Q8TDH9 187 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 MTMR8Q96EF0 704 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 FEM1CQ96JP0 617 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 TRMT61BQ9BVS5 477 aaKnown RBP13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 RAD21L1Q9H4I0 556 aa13.77□□□□□ -0.2
PRPF38A-201ENST00000257181 SUDS3Q9H7L9 328 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms