RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 MAGEA3P43357 314 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 SLC20A2Q08357 652 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 AP1B1Q10567 949 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 TIGD5Q53EQ6 642 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 UNC5AQ6ZN44 842 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 TMEM86AQ8N2M4 240 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 ZNF75CPQ92670 426 aaPredicted RBP22.39■■□□□ 1.18
CLN6-201ENST00000249806 RCOR3Q9P2K3 495 aaPredicted RBP22.39■■□□□ 1.18
CLN6-201ENST00000249806 STARD13Q9Y3M8 1113 aa22.39■■□□□ 1.18
CLN6-201ENST00000249806 FAM72CH0Y354 149 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 I6L893 689 aaPredicted RBP22.39■■□□□ 1.17
CLN6-201ENST00000249806 MGEA5O60502 916 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 DNAJC8O75937 253 aaPredicted RBP22.39■■□□□ 1.17
CLN6-201ENST00000249806 TOMM70O94826 608 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 POMCP01189 267 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 CD52P31358 61 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 THPOP40225 353 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 DAOAP59103 153 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 MGAT3Q09327 533 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 SEPT7Q16181 437 aaKnown RBP22.39■■□□□ 1.17
CLN6-201ENST00000249806 FAM72AQ5TYM5 149 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 FAM72DQ6L9T8 149 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 SH2D5Q6ZV89 423 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 FAM72BQ86X60 149 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 ECHDC2Q86YB7 292 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 PSTKQ8IV42 348 aaKnown RBP22.39■■□□□ 1.17
CLN6-201ENST00000249806 HACE1Q8IYU2 909 aa22.39■■□□□ 1.17
CLN6-201ENST00000249806 UGT1A9O60656 530 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 GSTA1P08263 222 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 PYGBP11216 843 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 TPSB2P20231 275 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 FLT3LGP49771 235 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 TPSAB1Q15661 275 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 UPP1Q16831 310 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 GALNTL6Q49A17 601 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 SLC26A11Q86WA9 606 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 LRRC6Q86X45 466 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 ZNF276Q8N554 614 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 UGT1A7Q9HAW7 530 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 UGT1A10Q9HAW8 530 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 UGT1A8Q9HAW9 530 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 ALG13Q9NP73 1137 aaKnown RBP22.38■■□□□ 1.17
CLN6-201ENST00000249806 PADI3Q9ULW8 664 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 GIT1Q9Y2X7 761 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 FAM155AB1AL88 458 aaPredicted RBP22.38■■□□□ 1.17
CLN6-201ENST00000249806 H3BRJ5 948 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 GPR182O15218 404 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 LPXNO60711 386 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 EDF1O60869 148 aaKnown RBP22.38■■□□□ 1.17
CLN6-201ENST00000249806 APOEP02649 317 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 SEMA5AQ13591 1074 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 MFSD14CQ5VZR4 134 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 TRMT10BQ6PF06 316 aaKnown RBP22.38■■□□□ 1.17
CLN6-201ENST00000249806 COLGALT1Q8NBJ5 622 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 CCNYQ8ND76 341 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 ALKBH8Q96BT7 664 aaKnown RBP22.38■■□□□ 1.17
CLN6-201ENST00000249806 P2RY11Q96G91 374 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 SPC25Q9HBM1 224 aa22.38■■□□□ 1.17
CLN6-201ENST00000249806 PIH1D1Q9NWS0 290 aaKnown RBP22.38■■□□□ 1.17
CLN6-201ENST00000249806 A0A0A0MRY4 1105 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 NCAM1P13591 858 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 PRKCHP24723 683 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 ADRA1BP35368 520 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 BZW1Q7L1Q6 419 aaKnown RBP22.37■■□□□ 1.17
CLN6-201ENST00000249806 SPATA13Q96N96 652 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 EBNA1BP2Q99848 306 aaKnown RBP22.37■■□□□ 1.17
CLN6-201ENST00000249806 WDR6Q9NNW5 1121 aaKnown RBP22.37■■□□□ 1.17
CLN6-201ENST00000249806 HACD1B0YJ81 288 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 TRDMT1O14717 391 aaKnown RBP22.37■■□□□ 1.17
CLN6-201ENST00000249806 TM9SF1O15321 606 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 ASGR1P07306 291 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 RNF43Q68DV7 783 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 ANKLE1Q8NAG6 615 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 HASPINQ8TF76 798 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 LRRC39Q96DD0 335 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 RTP3Q9BQQ7 232 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 PRDM12Q9H4Q4 367 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 RXFP1Q9HBX9 757 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 KLC4Q9NSK0 619 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 SEPT10Q9P0V9 454 aa22.37■■□□□ 1.17
CLN6-201ENST00000249806 TRIM49D1C9J1S8 452 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 RNF103O00237 685 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 EEF2KO00418 725 aaKnown RBP22.36■■□□□ 1.17
CLN6-201ENST00000249806 CAPN15O75808 1086 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 RAB41Q5JT25 222 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 RFX8Q6ZV50 586 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 PDCD7Q8N8D1 485 aaKnown RBP22.36■■□□□ 1.17
CLN6-201ENST00000249806 EDEM1Q92611 657 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 PLCD4Q9BRC7 762 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 UPF3AQ9H1J1 476 aaKnown RBP22.36■■□□□ 1.17
CLN6-201ENST00000249806 CDH9Q9ULB4 789 aa22.36■■□□□ 1.17
CLN6-201ENST00000249806 HHLA1C9JL84 531 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 B3GAT3O94766 335 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 FBXO21O94952 628 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 BRCC3P46736 316 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 CRADDP78560 199 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 SLC18A2Q05940 514 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 DPYSQ14117 519 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 PRKD1Q15139 912 aaPredicted RBP22.35■■□□□ 1.17
CLN6-201ENST00000249806 TTC39BQ5VTQ0 682 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms