RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CDH6P55285 790 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 EFEMP1Q12805 493 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 SEMA3BQ13214 749 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 KRT81Q14533 505 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 COL19A1Q14993 1142 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 PRPF38BQ5VTL8 546 aaKnown RBP13.41□□□□□ -0.26
LSM8-201ENST00000249299 DAB2IPQ5VWQ8 1189 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 TXNRD3NBQ6F5E7 133 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 BBS12Q6ZW61 710 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 PDZD4Q76G19 769 aaPredicted RBP13.41□□□□□ -0.26
LSM8-201ENST00000249299 CTAGE6Q86UF2 777 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
LSM8-201ENST00000249299 CTAGE4Q8IX94 777 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 TSC1Q92574 1164 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 RNF34Q969K3 372 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 ZNF707Q96C28 371 aaPredicted RBP13.41□□□□□ -0.26
LSM8-201ENST00000249299 FCRL2Q96LA5 508 aaPredicted RBP13.41□□□□□ -0.26
LSM8-201ENST00000249299 RUNDC3BQ96NL0 473 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
LSM8-201ENST00000249299 DCLK3Q9C098 648 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 NACA2Q9H009 215 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 TKTL2Q9H0I9 626 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 PCDH18Q9HCL0 1135 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 MTMR10Q9NXD2 777 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 ARIH1Q9Y4X5 557 aaPredicted RBP13.41□□□□□ -0.26
LSM8-201ENST00000249299 GBF1Q92538 1859 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 TRANK1O15050 2925 aa13.41□□□□□ -0.26
LSM8-201ENST00000249299 hCG_1818297A0A087WSY0 165 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 CCDC195A0A1B0GUA6 201 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 H3BRJ5 948 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 ZNF185O15231 689 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 CCL16O15467 120 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 RFPL2O75678 378 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 RHOP08100 348 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 TCF3P15923 654 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 HARS2P49590 506 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 DNA2P51530 1060 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 ATXN1P54253 815 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 DPYSL3Q14195 570 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 SMTNL2Q2TAL5 461 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 ZC3H12AQ5D1E8 599 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 KCNT1Q5JUK3 1230 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 DRICH1Q6PGQ1 229 aaPredicted RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 MFSD7Q6UXD7 560 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 RBM23Q86U06 439 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 CCDC185Q8N715 623 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 SPATA4Q8NEY3 305 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 VN1R2Q8NFZ6 395 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 ADAM32Q8TC27 787 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 HSPH1Q92598 858 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 EPAS1Q99814 870 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 DDX50Q9BQ39 737 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 CORO1BQ9BR76 489 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 KLF16Q9BXK1 252 aaPredicted RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 ATXN3LQ9H3M9 355 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 DHX35Q9H5Z1 703 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 TASP1Q9H6P5 420 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 DNMT3BQ9UBC3 853 aaKnown RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 SFMBT1Q9UHJ3 866 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 FEZ2Q9UHY8 353 aaPredicted RBP13.4□□□□□ -0.26
LSM8-201ENST00000249299 STOML2Q9UJZ1 356 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 ZNF510Q9Y2H8 683 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
LSM8-201ENST00000249299 SLC12A8A0AV02 714 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 TBX18O95935 607 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 HDCP19113 662 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 IL4RP24394 825 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 HOXC13P31276 330 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 NR2C2P49116 596 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 SLC11A2P49281 568 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 HYAL1Q12794 435 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 ADAM15Q13444 863 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 RAB6CQ53S08 254 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 TCEAL5Q5H9L2 206 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 PRSS36Q5K4E3 855 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 BZW1Q7L1Q6 419 aaKnown RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 C12orf50Q8NA57 414 aaPredicted RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 SMG7Q92540 1137 aaKnown RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 CALN1Q9BXU9 219 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 RAB6CQ9H0N0 254 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 STIM2Q9P246 746 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 PPARGC1AQ9UBK2 798 aaKnown RBP13.39□□□□□ -0.27
LSM8-201ENST00000249299 OR12D3Q9UGF7 316 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 RASAL2Q9UJF2 1139 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 ARHGAP26Q9UNA1 814 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 RAD54BQ9Y620 910 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 LAMA3Q16787 3333 aa13.39□□□□□ -0.27
LSM8-201ENST00000249299 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms