RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 TNIP3Q96KP6 325 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
SNAI1-201ENST00000244050 LPIN3Q9BQK8 851 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 KLC2Q9H0B6 622 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 GRID1Q9ULK0 1009 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 CHMP2BQ9UQN3 213 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 HEY1Q9Y5J3 304 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 TCRBV9S1A1TA0A576 114 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 TRDMT1O14717 391 aaKnown RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 GCATO75600 419 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 FAM155BO75949 473 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 POMCP01189 267 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 GSTA2P09210 222 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 CCDC130P13994 396 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 TFE3P19532 575 aaPredicted RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 WARSP23381 471 aaKnown RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 ADORA2BP29275 332 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 HHATQ5VTY9 493 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 PSTKQ8IV42 348 aaKnown RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 BANPQ8N9N5 519 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 LRRC8CQ8TDW0 803 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 LRRC39Q96DD0 335 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 MRRFQ96E11 262 aaKnown RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 ETNK2Q9NVF9 386 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNAI1-201ENST00000244050 PHTF1Q9UMS5 762 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
SNAI1-201ENST00000244050 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 XPO1O14980 1071 aaKnown RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 MGRN1O60291 552 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 MATKP42679 507 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 YWHAZP63104 245 aaKnown RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 GRIK3Q13003 919 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SLC45A4Q5BKX6 768 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 FITM2Q8N6M3 262 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 CCDC63Q8NA47 563 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 BADQ92934 168 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SENP8Q96LD8 212 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SEZ6LQ9BYH1 1024 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 VPS11Q9H270 941 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 ETNK1Q9HBU6 452 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 RGS18Q9NS28 235 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 RCOR3Q9P2K3 495 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 PRUNE2Q8WUY3 3088 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 VCANP13611 3396 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 C1QAP02745 245 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 LCP1P13796 627 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 TPSB2P20231 275 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 IGFBP6P24592 240 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 ITGB8P26012 769 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SKIV2L2P42285 1042 aaKnown RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 MAGEA3P43357 314 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 NCALDP61601 193 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 YWHAGP61981 247 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SLC18A2Q05940 514 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 MGAT5Q09328 741 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SLC10A2Q12908 348 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 BFSP2Q13515 415 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 TPSAB1Q15661 275 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 UPP1Q16831 310 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 KBTBD12Q3ZCT8 623 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 C1orf53Q5VUE5 145 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 FAM47EQ6ZV65 393 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SH2D5Q6ZV89 423 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 OSTM1Q86WC4 334 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 PARP9Q8IXQ6 854 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 AGGF1Q8N302 714 aaeCLIP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 ZNF276Q8N554 614 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 C3orf58Q8NDZ4 430 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 QKIQ96PU8 341 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 CSPG4P5Q96PW8 444 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 KCTD15Q96SI1 283 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 COL25A1Q9BXS0 654 aaPredicted RBP13.12□□□□□ -0.31
SNAI1-201ENST00000244050 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
SNAI1-201ENST00000244050 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms