RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 PALMDQ9NP74 551 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 NDFIP2Q9NV92 336 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 DDIT4Q9NX09 232 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 PCYOX1Q9UHG3 505 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 XPO7Q9UIA9 1087 aaKnown RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 SNED1Q8TER0 1413 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 CCNE2O96020 404 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 OCM2P0CE71 109 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 OCMP0CE72 109 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 SLC2A3P11169 496 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ELNP15502 786 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 KRT4P19013 534 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 HSPA13P48723 471 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 HPCAP84074 193 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 YWHAHQ04917 246 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 TFDP3Q5H9I0 405 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ART4Q93070 314 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 OLA1Q9NTK5 396 aaKnown RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 TNFSF13BQ9Y275 285 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 NRCAMQ92823 1304 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 NCF2P19878 526 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 AKAP5P24588 427 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 LHX1P48742 406 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 CAPSQ13938 189 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 IYDQ6PHW0 289 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 RPRD1AQ96P16 312 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 CATSPERBQ9H7T0 1116 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 AVENQ9NQS1 362 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 NINJ2Q9NZG7 142 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 DMTF1Q9Y222 760 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 C3orf70A6NLC5 250 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 M0R2N6 131 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 FCHO1O14526 889 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 SNX2O60749 519 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 HMGCRP04035 888 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 MYL2P10916 166 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 MYL4P12829 197 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 CDK16Q00536 496 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 CLNKQ7Z7G1 428 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 USP33Q8TEY7 942 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 SLC7A5P2Q9GIP4 190 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 PARVBQ9HBI1 364 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 PCDH18Q9HCL0 1135 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 EURLQ9NYK6 297 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 HBS1LQ9Y450 684 aaKnown RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 H0Y626 953 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 UQCRBP14927 111 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ECHS1P30084 290 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 PDK2Q15119 407 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ACSBG2Q5FVE4 666 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 RFWD3Q6PCD5 774 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 SLC25A41Q8N5S1 370 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ATP6V0D2Q8N8Y2 350 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 CD99L2Q8TCZ2 262 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 KAT5Q92993 513 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 C12orf42Q96LP6 360 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 MBOAT7Q96N66 472 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 CADM1Q9BY67 442 aaKnown RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 HACD3Q9P035 362 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 COL20A1Q9P218 1284 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 ZC3H7BQ9UGR2 993 aaKnown RBP11.29□□□□□ -0.6
COPA-201ENST00000241704 PCDHGA4Q9Y5G9 962 aa11.29□□□□□ -0.6
COPA-201ENST00000241704 PSMD3O43242 534 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 ATP9BO43861 1147 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 TBX10O75333 385 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
COPA-201ENST00000241704 KRT75O95678 551 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 EEF1DP29692 281 aaKnown RBP11.28□□□□□ -0.6
COPA-201ENST00000241704 HDAC4P56524 1084 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 CXorf38Q8TB03 319 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 ULK4Q96C45 1275 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 FRMD8Q9BZ67 464 aaPredicted RBP11.28□□□□□ -0.6
COPA-201ENST00000241704 C10orf88Q9H8K7 445 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 ADGRA3Q8IWK6 1321 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 FZD9O00144 591 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
COPA-201ENST00000241704 TLR2O60603 784 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 SPAG6O75602 509 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 NDST1P52848 882 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
COPA-201ENST00000241704 PPIL6Q8IXY8 311 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms