RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.24
NEK9-201ENST00000238616 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.24
NEK9-201ENST00000238616 CPA4Q9UI42 421 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 A0A087WZ62 844 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 ITGALP20701 1170 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 NRG3P56975 720 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 IRX1P78414 480 aaPredicted RBP13.52□□□□□ -0.24
NEK9-201ENST00000238616 GNA13Q14344 377 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 DNAJC9Q8WXX5 260 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 ATG2BQ96BY7 2078 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 SLC16A3O15427 465 aaKnown RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 SLC25A27O95847 323 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 EML3Q32P44 896 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 GPAT3Q53EU6 434 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 PPM1LQ5SGD2 360 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 SMYD1Q8NB12 490 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 KLHL3Q9UH77 587 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 IGF2BP3O00425 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
NEK9-201ENST00000238616 AGKQ53H12 422 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 KIAA1324Q6UXG2 1013 aaKnown RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 ENKURQ8TC29 256 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 RERGQ96A58 199 aaPredicted RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 GPAMQ9HCL2 828 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 VPS51Q9UID3 782 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 AP4S1Q9Y587 144 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 SDR42E2A6NKP2 422 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 PSMD11O00231 422 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 COPZ1P61923 177 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 CDK5RAP1Q96SZ6 601 aaKnown RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 PPP2R3BQ9Y5P8 575 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 O00370 1275 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 PRG2P13727 222 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 GEMP55040 296 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 KCNH7Q9NS40 1196 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 MTMR4Q9NYA4 1195 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 SUCOQ9UBS9 1254 aaKnown RBP13.52□□□□□ -0.25
NEK9-201ENST00000238616 SNX12Q9UMY4 172 aa13.52□□□□□ -0.25
NEK9-201ENST00000238616 GTPBP1O00178 669 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 INPP4BO15327 924 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ZNF37AP17032 561 aaPredicted RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 FGFR3P22607 806 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 CATSPER2Q96P56 530 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 NIF3L1Q9GZT8 377 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 DSEQ9UL01 958 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 SF3B1O75533 1304 aaKnown RBP eCLIP13.51□□□□□ -0.253e-9■■■■■ 206.8
NEK9-201ENST00000238616 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 LOC100506127A0A0U1RQW1 187 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 CEBPGP53567 150 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ADIGQ0VDE8 80 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ERMARDQ5T6L9 678 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 WDR19Q8NEZ3 1342 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 FAM120BQ96EK7 910 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 CDADC1Q9BWV3 514 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ZCCHC11Q5TAX3 1644 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 SCAMP3O14828 347 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 C21orf59P57076 290 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 CYP4F2P78329 520 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 CYP4F3Q08477 520 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 PROX1Q92786 737 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 ZNF70Q9UC06 446 aaPredicted RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 MFN2O95140 757 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 SNUPNO95149 360 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 ALOX12P18054 663 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 TYMPP19971 482 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 HAO1Q9UJM8 370 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 RAD51CO43502 376 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 SEC22BO75396 215 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 CLCN3P51790 818 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 RPL10AP62906 217 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 RIPOR1Q6ZS17 1223 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 RMND5BQ96G75 393 aaPredicted RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 BPIFA3Q9BQP9 254 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 TMEM121Q9BTD3 319 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 PIGUQ9H490 435 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 CHKBQ9Y259 395 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 KIAA0391O15091 583 aaKnown RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 CUL2Q13617 745 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 FBXO42Q6P3S6 717 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 AGGF1Q8N302 714 aaeCLIP13.51□□□□□ -0.25
NEK9-201ENST00000238616 GTF3C2Q8WUA4 911 aaPredicted RBP13.51□□□□□ -0.25
NEK9-201ENST00000238616 CGRRF1Q99675 332 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 TOR4AQ9NXH8 423 aa13.51□□□□□ -0.25
NEK9-201ENST00000238616 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms