RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 HIBCHQ6NVY1 386 aaPredicted RBP24.63■■□□□ 1.53
RRP9-201ENST00000232888 C16orf59Q7L2K0 433 aa24.63■■□□□ 1.53
RRP9-201ENST00000232888 PLXNA3P51805 1871 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.62■■□□□ 1.53
RRP9-201ENST00000232888 OPA1O60313 960 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 URODP06132 367 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 VPS41P49754 854 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 USP46P62068 366 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 MORF4L2Q15014 288 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 PAFAH1B3Q15102 231 aaKnown RBP24.62■■□□□ 1.53
RRP9-201ENST00000232888 PSRC1Q6PGN9 363 aaPredicted RBP24.62■■□□□ 1.53
RRP9-201ENST00000232888 ZC3H18Q86VM9 953 aaKnown RBP24.62■■□□□ 1.53
RRP9-201ENST00000232888 UNC45BQ8IWX7 931 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 MAGEB5Q9BZ81 275 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 CRISPLD1Q9H336 500 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.62■■□□□ 1.53
RRP9-201ENST00000232888 GMIPQ9P107 970 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 SSX2IPQ9Y2D8 614 aa24.62■■□□□ 1.53
RRP9-201ENST00000232888 ADAM12O43184 909 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 GJB5O95377 273 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 ACTN2P35609 894 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 PMS2P54278 862 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 TPI1P60174 286 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 KCTD19Q17RG1 926 aaPredicted RBP24.61■■□□□ 1.53
RRP9-201ENST00000232888 TMCO2Q7Z6W1 182 aaPredicted RBP24.61■■□□□ 1.53
RRP9-201ENST00000232888 ZNF276Q8N554 614 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 FAM71DQ8N9W8 422 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 GLIS1Q8NBF1 620 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 OVCA2Q8WZ82 227 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 CDK5RAP1Q96SZ6 601 aaKnown RBP24.61■■□□□ 1.53
RRP9-201ENST00000232888 ADAM7Q9H2U9 754 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 USP29Q9HBJ7 922 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 SHOC2Q9UQ13 582 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 INSL6Q9Y581 213 aa24.61■■□□□ 1.53
RRP9-201ENST00000232888 SPDYE4A6NLX3 237 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 SLC38A8A6NNN8 435 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 ZBBXA8MT70 800 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 CREB3O43889 395 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 MTA1Q13330 715 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 RAB33AQ14088 237 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 SLC45A4Q5BKX6 768 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 TRMT10CQ7L0Y3 403 aaKnown RBP24.6■■□□□ 1.53
RRP9-201ENST00000232888 FIBCD1Q8N539 461 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 CASP10Q92851 521 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 BADQ92934 168 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 UBE2OQ9C0C9 1292 aaKnown RBP24.6■■□□□ 1.53
RRP9-201ENST00000232888 PABPC3Q9H361 631 aaKnown RBP24.6■■□□□ 1.53
RRP9-201ENST00000232888 OR12D3Q9UGF7 316 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 TLR6Q9Y2C9 796 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 ATP8A1Q9Y2Q0 1164 aa24.6■■□□□ 1.53
RRP9-201ENST00000232888 AGPSO00116 658 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 DCLK1O15075 740 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ZDHHC11BP0C7U3 371 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ZSCAN5DPP0CG00 497 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 RPL22P35268 128 aaKnown RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 GDF10P55107 478 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 GBE1Q04446 702 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 TAF10Q12962 218 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ACBD5Q5T8D3 534 aaPredicted RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 HOOK3Q86VS8 718 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 RELL1Q8IUW5 271 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ZCCHC9Q8N567 271 aaKnown RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 PDZD8Q8NEN9 1154 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 UBLCP1Q8WVY7 318 aaPredicted RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 OLFM3Q96PB7 478 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ZIM3Q96PE6 472 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 QKIQ96PU8 341 aaKnown RBP eCLIP24.59■■□□□ 1.53
RRP9-201ENST00000232888 FERMT1Q9BQL6 677 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ANLNQ9NQW6 1124 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 TMPRSS4Q9NRS4 437 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 OSER1Q9NX31 292 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 DTLQ9NZJ0 730 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 FNIP2Q9P278 1114 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 PAK5Q9P286 719 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 I6L893 689 aaPredicted RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 NCAM2O15394 837 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 ETS1P14921 441 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 GGCXP38435 758 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 PGFP49763 221 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 NRG1Q02297 640 aaPredicted RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 PDK1Q15118 436 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 UAP1Q16222 522 aaPredicted RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 RNASEH2BQ5TBB1 312 aaKnown RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 GOLGA6L1Q8N7Z2 621 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 SH3GL2Q99962 352 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 PHACTR1Q9C0D0 580 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 BRD8Q9H0E9 1235 aa24.59■■□□□ 1.53
RRP9-201ENST00000232888 MRPL17Q9NRX2 175 aaKnown RBP24.59■■□□□ 1.53
RRP9-201ENST00000232888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.59■■□□□ 1.53
RRP9-201ENST00000232888 KCNU1A8MYU2 1149 aa24.58■■□□□ 1.52
RRP9-201ENST00000232888 C2CD2LO14523 706 aa24.58■■□□□ 1.52
RRP9-201ENST00000232888 SOAT2O75908 522 aa24.58■■□□□ 1.52
RRP9-201ENST00000232888 RPL17P18621 184 aaKnown RBP24.58■■□□□ 1.52
RRP9-201ENST00000232888 ATF6P18850 670 aa24.58■■□□□ 1.52
RRP9-201ENST00000232888 KPNA1P52294 538 aaPredicted RBP24.58■■□□□ 1.52
RRP9-201ENST00000232888 EIF3BP55884 814 aaKnown RBP24.58■■□□□ 1.52
RRP9-201ENST00000232888 SLC10A2Q12908 348 aaPredicted RBP24.58■■□□□ 1.52
RRP9-201ENST00000232888 TADA2BQ86TJ2 420 aa24.58■■□□□ 1.52
RRP9-201ENST00000232888 PPIL6Q8IXY8 311 aa24.58■■□□□ 1.52
RRP9-201ENST00000232888 VPS52Q8N1B4 723 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms