RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SLC44A4Q53GD3 710 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 MARC1Q5VT66 337 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ZCCHC8Q6NZY4 707 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 RIPOR1Q6ZS17 1223 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 NECAB2Q7Z6G3 386 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ABRAQ8N0Z2 381 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 OSMRQ99650 979 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 LACRTQ9GZZ8 138 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 WDR27A2RRH5 827 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 SAC3D1A6NKF1 404 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FAM220BPB1ANY3 271 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FAM25AB3EWG3 89 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FAM25CB3EWG5 89 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FAM25GB3EWG6 89 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 UBOX5O94941 541 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 RPLP2P05387 115 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 YWHAQP27348 245 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PPP2R1BP30154 601 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 GCLCP48506 637 aaPredicted RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ST13P50502 369 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FAM98BQ52LJ0 330 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 N4BP2L1Q5TBK1 243 aaPredicted RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ZNF544Q6NX49 715 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 DEFB107AQ8IZN7 70 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ROGDIQ9GZN7 287 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PARVBQ9HBI1 364 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 POLLQ9UGP5 575 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 DDX20Q9UHI6 824 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PCDH8O95206 1070 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 MYL4P12829 197 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 MAD2L1Q13257 205 aaPredicted RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TYW3Q6IPR3 259 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ERO1BQ86YB8 467 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 HOMEZQ8IX15 550 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ZSWIM2Q8NEG5 633 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 EDEM1Q92611 657 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 DCLK3Q9C098 648 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 RNPEPQ9H4A4 650 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 DIABLOQ9NR28 239 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 BARX2Q9UMQ3 279 aaPredicted RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 SPATA31A6Q5VVP1 1343 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 CASZ1Q86V15 1759 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 DSG3P32926 999 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 SKIV2L2P42285 1042 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TRPC4APQ8TEL6 797 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TATDN2Q93075 761 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 CEP41Q9BYV8 373 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ARMC7Q9H6L4 198 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 NAALADL1Q9UQQ1 740 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 MICAL2O94851 1124 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CLPTM1O96005 669 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TALDO1P37837 337 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PSMD7P51665 324 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 RAD23AP54725 363 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CBWD3Q5JTY5 395 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CBWD5Q5RIA9 395 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CDKAL1Q5VV42 579 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 FAM45BPQ6NSW5 357 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PRMT9Q6P2P2 845 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KCNMB4Q86W47 210 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 FAM228AQ86W67 206 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 MCOLN2Q8IZK6 566 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CDK20Q8IZL9 346 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KYQ8NBH2 561 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 SH3BP4Q9P0V3 963 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 ALDH2P05091 517 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 FGFR1P11362 822 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TPH1P17752 444 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PTENP60484 403 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
LAMA4-201ENST00000230538 NFIL3Q16649 462 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 DDR2Q16832 855 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 SPANXN3Q5MJ09 141 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TRMT11Q7Z4G4 463 aaKnown RBP11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TCF7L2Q9NQB0 619 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 AHSPQ9NZD4 102 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TSPAN16Q9UKR8 245 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 RAD51BO15315 384 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TSC22D2O75157 780 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CYP7B1O75881 506 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 MT-CO1P00395 513 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KRT6AP02538 564 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KRT6BP04259 564 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 NFICP08651 508 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PGAM1P18669 254 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KRT6CP48668 564 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PSMC6P62333 389 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 ADIGQ0VDE8 80 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CDH17Q12864 832 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PLEKHA7Q6IQ23 1121 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 UTP15Q8TED0 518 aaKnown RBP11.82□□□□□ -0.52
LAMA4-201ENST00000230538 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TMX2Q9Y320 296 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PSMD12O00232 456 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms